Capsella rubella (pink shepherd's-purse): 17880851
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Entry
17880851 CDS
T02984
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17880851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17880851
03036 Chromosome and associated proteins [BR:
crb03036
]
17880851
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
17880851
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
17880851
PBAF complex
17880851
GBAF(ncBAF) complex
17880851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
17880851
NCBI-ProteinID:
XP_006283074
UniProt:
R0F2V2
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MEEKRRDSSGTLASAGSSGDSPASEPMPATRRRGGGLKRKANALGGSYFSSSTPSKRMLT
REKAMLASFSPVHNGPLTRARQAPSNMLSAADGVKSELLNVAVGTDGEKPKEEEERNKAI
REWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIHSLEERSLPSFFNGKSEGRTS
ELYREIRNWIMRKFHSNPNIQIEIKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTD
ASSTASDHDDLGDKESLLNSLYQFQADEACPPHVHKPRLTAQATPSGLFPDPMAVDELLK
QEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDNMSSSDFILMEPAEA
PGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQID
YKDPRTKDATDLAVSKDDISVPKDALEEGENKTRVDKDETMKEDPVPEVDNEGKVSQESS
KPEETNDVEADQKTPKLETVADERCKDETDENIALKALAEAFEDVGYSSTPEASFSFADL
GNPVMGLAVFLVRLAGSDVATASARASVKSLHNNSGLLLATRHCYILEDPPDNKKDSTES
KSANAEGNDDNNVHKDEQPEEKSQKPEDVSLNSDDREMRDTETGKEILDSVSEERQPGSR
NENSTTKPDAVQEKESSKPVTTDNSEKPADKCPSQDKCSGKELQEPLKDGNKLSSVDKDA
SQAMVSEAAADPSQPEASKHVEMKDMLQSEKDSQDVVKTVREEVQEAKEEGAKDVLSTPD
TSVVQEPIGSASAPENGIAGENPNKEGKKEKDVCEGTKDKHNIEKLKRAAISAISAAAVK
ANNLAKQEEDQIRQLSGSLIEKQLRKLEAKLSIFNEAESLTMRVREQLERSRQRLYHERA
QIIAARLGVPPSMSSKASLPTNRIAANFANVAPRPPLGMAFPRPPMPRPPPGFTIPGSFV
AATTMAGSSDPPPGSENVSSV
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacgacgcgattcctctggaaccctagcttctgctggtagctctggagat
tctccggcctctgagccgatgccggcgacacggcgccgtggcggaggtttgaaaaggaaa
gcgaatgctctcgggggttcttatttctcctcttctacgccgtctaagaggatgttgacg
cgtgagaaggctatgcttgcgtctttttctccggttcataatgggcctttaactcgagct
cgtcaggcaccgagtaatatgctctcggcggcggatggggttaagtcggagcttttgaat
gttgcggtgggtacggatggagagaagcccaaggaggaggaagagcgtaataaggcgatc
cgtgagtgggaggctctggaggctaagatcgaagctgatttcgaagcaattagatctcgt
gacagtaatgttcatgtagtgcctaatcattgcggttggttttcatgggaaaaaattcac
tctcttgaggagcgttcattgccctctttctttaacggcaagtcggaaggtcgcacttcg
gagttatatagggaaatacggaattggatcatgagaaaatttcattccaatccgaacata
caaatagaaatcaaagacttaacagaactcgaggttggagactcagaagcaaagcaagag
gtgatggagttcttggactactggggattaatcaatttccacccatttccaccaacagat
gctagttcaacggcttctgatcatgatgatttaggggataaggagtcactgctcaacagt
ttatatcaatttcaagctgatgaggcttgccctcctcatgttcacaaacctcgtctcaca
gcacaagctacgccatcagggttgtttccagatccgatggctgttgatgaattgctgaag
caagagggtccagcagttgaatatcactgcaattcttgttcagctgattgctctcgcaag
cgctaccactgcccgaaacaggcagattttgacttatgtacggaatgctttaacagtggc
aagttcagctcagataatatgtcatcttctgattttatactaatggagcctgctgaggcc
cctggcgttggtagtgggaagtggactgatcaagagactcttcttctccttgaagcttta
gaaatcttcaaggaaaattggaatgagattgcagagcatgttgctacaaaaacaaaagct
cagtgtatgcttcattttcttcaaatgccaattgaggatgcatttcttgaccaaattgac
tacaaagatccgcgtacaaaagacgcgacagatttagctgtgtctaaagatgatatttct
gttccaaaagatgcacttgaagagggagagaataagacacgtgttgataaagatgagact
atgaaggaagatccagtaccagaagttgacaatgaaggaaaagtctctcaggaatcttcc
aagcctgaagaaactaatgatgtggaagcagaccagaaaacacccaaactagaaaccgtc
gctgacgaaagatgtaaggatgaaactgacgaaaacattgctctgaaagctcttgctgaa
gcttttgaagatgttggttattcctccacacctgaagcctcgttttcctttgctgactta
ggaaaccctgtcatgggactggcagtctttctggtaagattggcaggatctgatgttgct
actgcgtcagcccgggcttccgtaaaatctcttcacaacaattctggactgctgcttgcg
acaagacattgttatattctggaagatccaccagacaacaagaaggattcaactgaatca
aaaagtgccaatgcagaggggaatgatgataataatgtccataaagatgagcaaccagaa
gaaaaaagccagaaaccagaagatgtctccttgaattcagatgatagggaaatgcgagat
actgaaacaggtaaagaaattctggattcagtctctgaagaaaggcaacctggttctcga
aatgaaaattctactacaaaaccagatgccgtacaagaaaaagaatctagtaagccagtc
acaactgacaactcagagaaaccagcggataaatgtccatcgcaggacaaatgttcaggg
aaggagcttcaagaacctttaaaagatggtaataagctttctagtgtagataaagatgcc
tctcaagcaatggtctccgaggcagctgcagatccttctcagccagaagcatcaaaacat
gtggagatgaaggatatgctacagtcagagaaggattctcaagatgtggtcaagacagta
agagaggaggttcaagaggctaaagaggagggtgcaaaggatgttcttagtactccagac
acgtctgttgtccaggagcccattggatcagcttctgcaccggaaaatggaatagctggt
gaaaatccaaataaagaaggaaagaaagagaaggatgtttgtgaagggacaaaagacaaa
cataatatcgagaagcttaagcgcgcagccatctccgctatctcagccgcagcagtaaag
gcaaataatcttgcaaaacaagaagaagatcaaatcagacaactttctggatcattgata
gagaagcagttacgcaaactagaagcaaagctatctatcttcaatgaagctgaaagcttg
acaatgagggtaagagagcaattagaaagatcaaggcaacggctatatcatgaaagggct
caaatcatcgcagctcgactcggtgttccaccttcaatgtcttcaaaagcatcgttacca
acaaacagaatcgctgcaaattttgctaatgtagctcctaggccacccttgggcatggca
tttccacgcccaccaatgccaaggcctcctccaggtttcaccattcctggttcttttgta
gctgctacaacaatggccggaagctcagatccacctccaggttcagaaaatgtttcgtcg
gtttag
DBGET
integrated database retrieval system
