KEGG   Capsella rubella (pink shepherd's-purse): 17880870
Entry
17880870          CDS       T02984                                 
Name
(RefSeq) serine hydroxymethyltransferase 5
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb00260  Glycine, serine and threonine metabolism
crb00460  Cyanoamino acid metabolism
crb00630  Glyoxylate and dicarboxylate metabolism
crb00670  One carbon pool by folate
crb01100  Metabolic pathways
crb01110  Biosynthesis of secondary metabolites
crb01200  Carbon metabolism
crb01230  Biosynthesis of amino acids
crb01240  Biosynthesis of cofactors
crb04981  Folate transport and metabolism
Module
crb_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:crb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    17880870
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    17880870
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    17880870
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    17880870
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    17880870
Enzymes [BR:crb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     17880870
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 17880870
NCBI-ProteinID: XP_006285986
UniProt: R0GPT7
LinkDB
Position
Unknown
AA seq 470 aa
MEPVSSWGNKHLVSVDPEIHGLIEKEKRRQCRGIELIAAENFTSLAVMEALGSPLTNKYS
EGMPGNRYYGGTEFIDEIESLCRSRALEAFHCHPKKWGVNVQPYSGSPANFAAYTALLQP
HDRMMGLDLPSGGHLSHGYYTSGGKNISATSIYFDNLPYKVDSFTGYIDYDKLEEKAMDF
RPKLIICGGTSYPREWDYARFRAVADKVGAVLLCDMAHNSALVAAQEAADPFEYCDIVTT
STHKSLRGPRAGMIFYRKGPKPAKKGQPEGAVYDFDEKINFAVFPALQSGPHNNKIGALA
VALKQAMAPSFKVYAKQVKANAACLASYLMGKGYCIVTGGTDNHLILWDLRPLDLTGNKL
EKLCDLCYITLNRNAVFGDTSFLSPGGVRIGTPAMTSRGLVEKDFEKIGEFLSRAVTLTL
AIQKQYGKVTKEFNKGLVNNKEIDELKADVEKFTYSFEMPGFLISETMYD
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggaaccagtctcttcttggggaaacaagcatcttgtctccgttgatccggagatccac
ggcctaatcgagaaggagaaacgtaggcaatgtcgaggaatcgaactcatcgcagccgag
aatttcacttccttggccgtcatggaagctctaggaagtccactcacaaataaatactct
gaaggtatgcctggaaaccgttactatggaggtaccgagttcatcgatgagatcgagagt
ctctgccgctcacgcgctctcgaggcattccattgccatccgaagaaatggggagttaac
gttcagccttactctggttcccctgctaatttcgccgcctacacggctttgctccagcct
catgatcgtatgatggggcttgatctgccttcaggtggtcatttgagtcatggttactat
acctctggtgggaagaacatctctgccacctctatctactttgataaccttccctacaag
gttgattcctttactggttacattgattacgacaagcttgaggagaaggctatggatttt
agacctaagttaatcatctgtggaggtacttcttaccctagggaatgggattacgcgaga
tttagggctgtcgcggataaggttggagctgttttgctctgcgacatggctcataacagt
gccctcgttgctgctcaggaagctgctgacccgtttgagtattgtgacattgtgacaacc
tcaactcacaagagcttgagaggtccaagggccggtatgatcttctacaggaagggacca
aaacccgccaagaaaggccaacccgagggagcagtttacgatttcgacgaaaaaatcaac
tttgctgtattccctgcgcttcaaagcggtcctcataataacaagattggtgctctagct
gttgcattgaagcaggctatggctcctagcttcaaggtttatgcaaaacaggtgaaagcc
aatgctgcttgccttgcaagttacctaatgggaaaaggatattgtattgtaaccggtgga
actgataaccaccttattctatgggatcttcgtcctcttgatttaaccggtaacaagctt
gagaagctttgcgatttgtgctacattacgttgaacaggaatgcagtatttggtgacact
agtttcctttctcctggaggtgtaagaattggtacacctgcgatgacatcgagaggattg
gtggagaaggactttgagaagataggggagttcctgagccgtgccgtgacactcacgttg
gccattcagaaacagtatggtaaggtgacgaaggagtttaacaagggtttggtgaacaac
aaagagatcgatgagctgaaggctgatgtcgagaagttcacttactcttttgaaatgcct
ggatttctcatctctgagacgatgtatgattag

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