Capsella rubella (pink shepherd's-purse): 17880903
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Entry
17880903 CDS
T02984
Name
(RefSeq) long chain base biosynthesis protein 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00600
Sphingolipid metabolism
crb01100
Metabolic pathways
crb04382
Cornified envelope formation
Module
crb_M00094
Ceramide biosynthesis
crb_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
17880903
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
17880903
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crb01007
]
17880903
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
17880903
Amino acid related enzymes [BR:
crb01007
]
Aminotransferase (transaminase)
Class II
17880903
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
17880903
NCBI-ProteinID:
XP_023634185
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MASKLVEMFNAGLLWVTKILDDPSARVVLFGVPIQGHLFLEALLGVVIFILLTQKSFKPP
KRPLTEQEIDELCDEWIPDPLIPPITEDMKHEPPVLESAAGPHTTVNGKDVVNFASANYL
GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCETRISKFLGTPDSILYSYGLS
TMFSTIPCFCKKGDIIVADEGVHWGIQNGLQLSRSTIVYFKHNDMESLRSTLEKIMTKYK
RSKNLRRYIVAEGVYQNSGQIAPLDEIVKLKEKYRFRVILDESNSFGVLGRSGRGLAEHH
GVPIEKIDVVTAAMGHALATEGGFCTGNARIIDYQRLSSSGYVFSASLPPYLASAAITAI
DVIDQNPDMLVKLKQNIALLWKGLSDIKGMSLTSNPESPIVFLKLEKSSGSAKEDLLLLE
EMADRALKEDSLLVVSSKRSFLDKCRLPVGIKLYVSSGHSESDLLIASESLKRLASELLL
KS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaagctcgtggaaatgtttaatgccggtttactttgggttacaaagattctg
gatgatccttcagctagagttgtcttgttcggtgtcccaatccaagggcatttatttttg
gaagccttgttgggtgttgtcattttcattctcctcactcagaagagcttcaaaccccct
aagcgaccattaacagaacaggaaatagatgagttatgtgatgaatggattcctgaccct
cttataccgccaattactgaagacatgaagcatgagcctccagttcttgaaagtgctgct
ggaccgcatacaacagttaatggtaaagacgtggtgaattttgcctcagctaattatctg
ggactcattggacacgagaagttgctggaatcatgtacttctgcattggaaaaatatggt
gtcggttcttgtggtcctcgtgggttctatggtacaattgatgtccaccttgattgcgaa
accagaatatcaaaatttttgggtactccggattccatcctctattcttatggactttcc
acgatgttcagcacaattccttgtttctgtaagaaaggcgatatcattgttgccgatgag
ggtgttcactgggggatacaaaatggactccagctttctagaagtacaattgtgtacttc
aagcacaatgacatggaatcccttagaagtaccctcgagaaaatcatgacaaagtacaag
cgctcaaagaacttgaggcgttatattgtagctgaaggtgtatatcagaattctggtcaa
attgcacctctggatgagatcgtaaaactaaaagagaagtatcggtttcgtgttatattg
gatgaaagcaactcttttggcgtacttggccgttctgggagaggtcttgcagagcatcat
ggtgtccctattgagaagatagatgttgtgactgctgcaatgggccatgcattagccaca
gaaggtggattttgcactgggaatgcccgcatcatcgattaccagagactcagcagttca
ggttatgtgttttctgcttctttgccaccataccttgcaagtgctgctatcaccgcgatt
gatgtcattgatcaaaaccctgatatgttagttaagctgaagcaaaatattgccttgtta
tggaaaggattgtcagatatcaagggtatgtccttaacaagcaacccagaatcacctatt
gttttcttgaaattagagaaatctagcggttcagctaaagaggatttgcttctacttgag
gaaatggctgaccgtgctctgaaggaagactcgttgttggttgtgagttctaaaaggtcg
tttcttgataaatgccggttacctgtgggaatcaaactatacgtttcatcaggacattcg
gaatctgatcttcttatagcatccgagtctctgaagagacttgcttcagagcttctactc
aagtcctga
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