Capsella rubella (pink shepherd's-purse): 17880936
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Entry
17880936 CDS
T02984
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crb01002
]
17880936
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17880936
04121 Ubiquitin system [BR:
crb04121
]
17880936
Enzymes [BR:
crb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
17880936
Peptidases and inhibitors [BR:
crb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
17880936
Membrane trafficking [BR:
crb04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
17880936
Ubiquitin system [BR:
crb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
17880936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
17880936
NCBI-ProteinID:
XP_006286194
UniProt:
R0FAQ5
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MVSRRGPSNTGAIVCILTDRFKVPNNWVSHISFATILGFAGLVLALKDGRFRNLKLFSAR
DEDSGDDSVHVPGLQNIGNNCFLNVILQALASCKDFRSFLQWVIEDARDTVAGELDQQFP
LTFALSALLQELCVVGRRRSVSNPREVMLALTDYTRNFNLTSQQDAAEALLHLISSLQEE
IVFCYRPIQSCNLSDVLFSRNLRMLAPTEGLHGLLELKRWHKHLRGPFDGILGSTLMCRT
CSSQISLEFQFFHTLPLSPLLHSGGSNIMFGCTLENCMKKFLVTEKVENFFCHRCWHGAA
GKYLSVIGAAETDIEKLRSCAVDEQCDCKTSLLLERMPWSNSYSHILKQLIISRFPKLLC
IQVQRASFNMYGESVKLSGHIAFPLVLDLSLFTPSPIGLNTEAGIQMSSKYQKPETSRSC
DLYRLVTVVEHFGRTGSGHYTVYRSVRVASQEEEEEECEELSWFSISDSEVCRVSESDVL
GAEASLLFYERLQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccgtagaggtccctccaatacaggggcgattgtctgtatcctcacagataga
ttcaaggttccgaacaattgggtttcgcatatatcattcgctactatacttggttttgct
ggtctcgtattggcccttaaggacggtcgattccgcaacctcaaactcttctccgctaga
gatgaagactccggagacgattctgttcacgtacctggcctgcaaaatatcgggaacaat
tgtttcctcaacgtgatcttacaggctctggccagctgcaaagatttccggagctttctt
caatgggttatagaggatgcgagagacacggtagcaggagaactggaccaacagtttcct
cttacttttgctctatctgccttgttacaagagctctgtgtagttggaagaagacgatct
gtatctaaccctcgtgaagttatgctggctttgactgattatacccgaaatttcaatttg
acaagccaacaggatgctgcagaagctcttcttcatcttatatcttctttgcaagaagag
attgtattttgttaccgtcccatccaaagttgtaatctatcagatgtactcttttctcgc
aacttgagaatgcttgcgcctactgaaggcctccatggtttgttggagcttaagagatgg
cataaacatttgcgtggaccatttgatggtattcttggtagtacgttgatgtgtcgaact
tgttcctctcagatttcattggagtttcagttttttcatactctgcctctttctccttta
ctccatagtggtggttccaacattatgtttggatgcactttggagaattgcatgaagaag
tttctagttactgagaaagttgaaaacttcttctgccatagatgctggcatggtgctgca
gggaaatatttatctgtgataggagcagctgagacagatatagaaaaactcaggagctgt
gccgtagatgaacagtgtgactgtaaaacttctcttcttcttgaaagaatgccttggtca
aatagctattcccacatattgaagcagttaatcatctcccgtttcccaaagcttctatgc
attcaagtgcaacgcgcttcatttaacatgtatggagaatccgtcaaactatcgggacat
atcgccttcccactcgtcttggacctctccttgttcacaccatctccaataggattaaac
acagaagcagggattcagatgtcgtcaaagtaccaaaagccagaaacatcaagaagctgc
gacctgtacaggctcgtaacagtggttgaacattttggtagaaccggaagcgggcattat
acagtttatagaagtgtgagagttgcatcacaagaggaagaagaagaagaatgtgaggaa
ttgagctggtttagtatatctgattcagaagtttgcagagtttcagagagtgatgttctt
ggtgctgaagctagcttgctcttctatgagaggcttcaataa
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integrated database retrieval system
