Capsella rubella (pink shepherd's-purse): 17881125
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Entry
17881125 CDS
T02984
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR17 isoform X2
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17881125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17881125
03036 Chromosome and associated proteins [BR:
crb03036
]
17881125
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
17881125
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
17881125
RSF complex
17881125
WICH complex
17881125
B-WICH complex
17881125
NORC complex
17881125
BRF complex
17881125
NuRF complex (fruit fly)
17881125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
CHDII_SANT-like
DUF1509
AAA_14
Motif
Other DBs
NCBI-GeneID:
17881125
NCBI-ProteinID:
XP_006286950
UniProt:
R0H8C7
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MARASKREVSSDEAYSSEEEEQVNNQANVEEDDEELEAVARSAASDEEEVAPDEAPVSDD
EVVPVEDDADEDEEDEEKAEISKREKARLKEMQKMKKEKIQQILDAQNASIDADMNNKGK
GRLKYLLQQTELFAHFAKSDPSPSQKKGKGRGRHSSKLTEEEEDEECLKEEEGGIGGSGG
TRLLTQPACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR
GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDVCVTS
FEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHE
LWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPP
KKETILKVGMSQMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAEP
GPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCR
IDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ
AQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNKDEL
LQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADF
YDFDDDDKDENKLDFKKIVSENWNDPPKRERKRNYSETEYFKQTLRQGAPAKPKEPRIPR
MPQLHDFQFFNIQRLTELYEKEVRYLMQTHQKTQMKDTIEVDEPEEVGDPLTAEEVEEKE
LLLEEGFSTWSRRDFNAFIRACEKYGRNDIKNIASEMEGKTEEEVERYAQVFQERYKELN
DYDRIIKNIERGEARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFM
ICMVHKLGYGNWDELKAAFRTSSVFRFDWFVKSRTTQELARRCDTLIRLIEKENQEYDER
ERQARKEKKLAKSATPSKRASGRQANESPSSLLKKRKQLSMDDYVSSGKRRK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggcttcgaagcgtgaggtttcttcggacgaggcttactcgtcagaggaggaa
gagcaagttaacaatcaggccaatgtggaagaagatgatgaggagctcgaggccgtcgct
cgctctgcggcctctgacgaagaagaggttgcccctgatgaagcacctgtctctgacgac
gaggttgtccccgtcgaagatgacgccgacgaggacgaagaagatgaggaaaaagctgaa
attagcaaacgtgagaaggccagacttaaagaaatgcagaagatgaagaaggagaaaatt
cagcaaattttagacgcccaaaatgcttccatagatgcagatatgaacaataaaggaaag
gggagattgaagtaccttctgcagcaaactgagttatttgcacattttgctaaaagtgac
ccatctccatcccagaagaaggggaaaggaaggggtcgtcattcctccaaactaactgaa
gaagaggaagatgaagagtgtttaaaagaagaagagggtggtataggtggatctggaggc
acacggttgctcacacagcccgcttgtattcaggggaagttaagagattatcagctagct
ggtttaaactggcttattcggttgtacgagaatggcataaatgggattcttgcagatgaa
atgggtctggggaagacacttcaaacaatttctttgttagcatacctgcatgagtacagg
ggaatcaatggccctcatatggtggttgctccaaaatcaacccttggtaactggatgaat
gagattcgccgattttgtcctgtcctacgtgctgtgaaattcctcggtaatcccgaggaa
aggagacatattcgcgaagaactgctagttgcggggaaattcgatgtttgtgttacaagt
tttgagatggctatcaaagaaaagacaacattacgccgttttagctggcgttatataatc
attgatgaagcacatcgaatcaagaatgagaattcactcctttcaaaaaccatgagactt
tttagcaccaattatcggcttcttatcacgggaaccccccttcagaataatctccatgaa
ttatgggcccttctcaattttcttctccctgaggtttttagttcagcagaaacttttgac
gaatggtttcaaatttctggtgaaaatgatcagcaagaagttgttcaacaacttcacaag
gttcttcgcccgtttcttcttcgaaggttaaaatcagatgtagagaaaggcctacctccg
aaaaaggagacaatacttaaagttggcatgtctcaaatgcaaaagcagtactataaggct
ttactgcagaaggatcttgaagtggttaatggtggtggagaacgcaaacgtctgttgaac
atagcaatgcaattgcgcaaatgctgcaatcacccttatctcttccagggcgcagagcct
gggcccccctataccacaggagatcaccttgtaacaaatgcaggtaagatggttctctta
gataaattgctacctaagttgaaggatcgtgattcaagggttctgatattttctcagatg
acaagacttttggatattcttgaggattatctaatgtatcgaggttaccagtactgccgt
attgatggaaatactggtggtgatgaacgagatgcttccatagaagcctacaacaaacca
ggaagtgagaaatttgttttcttgttatccaccagagctggagggcttggtatcaatctt
gctactgcagatgtggtgatcctttatgatagtgactggaaccctcaagttgacttgcaa
gctcaagatcgtgcccataggattggtcaaaaaaaagaagttcaagtattccggttctgc
acagagaatgcaattgaggcaaaagttatcgagagagcttacaagaagttggcacttgat
gctctggttattcagcaagggcgattggcagaacaaaaaactgttaataaggatgagtta
cttcaaatggtgagatatggtgctgaaatggtgttcagttctaaagatagcacaattaca
gatgaggatattgacagaatcattgccaaaggagaagaggcaacggctgaacttgatgct
aagatgaagaagttcactgaagatgcaatacagtttaaaatggatgacagcgctgacttt
tatgattttgacgatgatgataaggatgagaacaagctggacttcaaaaagattgtgagt
gagaattggaatgatccaccaaaaagagagagaaagcgcaactactctgaaactgaatac
ttcaagcaaacactgcgacaaggtgctccagctaaacctaaagagcctagaattccacgc
atgccccaattgcatgattttcaattctttaacatccagcgattgactgagctgtatgaa
aaagaagtgcgataccttatgcaaacacatcagaaaactcagatgaaagacaccattgaa
gttgatgaacctgaagaagttggagatcccttaactgcggaagaagtggaagaaaaggag
ctattgctggaagagggtttctcaacatggagcagaagagacttcaatgccttcattagg
gcgtgtgagaagtatggccggaacgacataaaaaatattgcctctgagatggaagggaaa
acagaggaagaggttgaacgatatgctcaagttttccaagagcgatacaaggagctgaat
gattacgatagaatcatcaagaatattgagaggggggaagcaagaatctctaggaaagat
gaaatcatgaaagctattgggaagaaattggatcgctacagaaacccgtggctggaattg
aagattcaatatggccagaacaaagggaaactttacaatgaagagtgtgaccgtttcatg
atatgcatggtccataaacttgggtatggaaactgggatgagctaaaggcggcgtttcgg
acatcctcagtgttcaggtttgactggtttgtaaaatcccgtacaactcaggaacttgct
aggagatgtgacacactgatccgattgattgagaaagagaatcaagaatatgatgagagg
gagaggcaagcccgcaaagaaaagaagcttgcaaagagtgcaacgccatcaaagcgagct
tcgggtaggcaagcaaatgagagcccatcatctcttctgaagaaaagaaagcagctgtca
atggatgactatgttagctcgggaaagcgtaggaaataa
DBGET
integrated database retrieval system
