Capsella rubella (pink shepherd's-purse): 17881132
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Entry
17881132 CDS
T02984
Name
(RefSeq) malate synthase
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00620
Pyruvate metabolism
crb00630
Glyoxylate and dicarboxylate metabolism
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb01200
Carbon metabolism
Module
crb_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
17881132
00630 Glyoxylate and dicarboxylate metabolism
17881132
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
17881132
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Paralog
GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
HpcH_HpaI
DUF6986
Motif
Other DBs
NCBI-GeneID:
17881132
NCBI-ProteinID:
XP_006286626
UniProt:
R0GRN9
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MELETSVYRPNVAVYDAPDGVEVRGRYDQIFAKILTREALGFVAQLQREFRGHVRYAMEC
RREARRRYNSGGVPGFDPSTKFIRDGDWVCAPVPLAVADRRVEITGPVERKMIINALNSG
AKVFMADFEDALSPSWENLMRGHVNLKDAVDGSITFHDKSRKRVYKLNDQTAKLFVRPRG
WHLPEAHILIDGEPATGCLVDFGLYFFHNYAKFRQTQGSGFGPFFYLPKMEHSREAKIWN
SVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDYIFSYVKT
FQAHPDRLLPDRVLVGMGQHFMRSYSDLLIRTCHKRGVHAMGGMAAQIPIRDDPKANEMA
LDLVRKDKLREVRAGHDGTWAAHPGLIPICMEAFTGHMGKNPNQIKSMKREDASAITEED
LLQIPRGVRTLEGLRLNTRVGIQYLAAWLTGSGSVPLYNLMEDAATAEISRVQNWQWIRY
GVELDGDGLGVRVSKELFGRVVEEEMERIEKEVGKEKFKKRMYKEACKMFTKQCTAPELD
DFLTLAVYNHIVAHHPINVSRL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgagacctcagtttatcgaccaaacgtcgccgtctatgatgcgccggatggc
gtggaggttagaggacggtacgaccaaatcttcgccaagattctgactagagaagctctt
ggctttgtggctcagttgcaaagagagtttcgtgggcacgtgaggtacgctatggagtgc
cggagagaggcacgacggcgttacaactctggaggcgttcctggctttgacccttccact
aagttcatcagggatggtgattgggtctgtgcccccgtccctctcgccgttgctgaccgc
agagttgagatcaccggtccggtcgagaggaagatgatcatcaacgctcttaactccgga
gctaaagtcttcatggctgatttcgaagacgcattgtctcctagttgggagaatctgatg
agagggcatgtgaacttgaaagatgcagttgatggatccattacgttccacgacaagtca
aggaaaagagtttacaagcttaacgaccaaaccgctaagctctttgtccggccaagagga
tggcatctcccggaggctcacatcctcatcgacggtgaacccgccactggatgtcttgtc
gattttggcctttacttcttccacaactacgccaaatttagacagactcaaggttccggt
tttggacccttcttctatcttcccaaaatggaacattctagggaagcaaagatatggaac
agcgtgttcgaacgagctgagaagatggctggaatagagagaggaagcattagagcaaca
gtgctgatcgagaccctccctgctgttttccagatgaatgagatactatatgaactgcgt
gatcactcggttggtttaaactgtggaaggtgggattatatcttcagctatgtcaaaacc
ttccaggctcaccctgaccgcctcttaccagaccgtgtcctagtcggcatgggacagcat
ttcatgagaagttactcggatcttctcatccgtacttgtcataagcgcggtgtccacgcc
atgggcggcatggctgcacagattccgataagagatgacccgaaagcgaatgagatggca
ttggatcttgtgaggaaagacaagctgagagaagtaagagcagggcatgatggaacatgg
gcggctcatccgggactcatcccaatatgcatggaagcattcacaggccacatggggaaa
aatccaaaccaaatcaaatcaatgaagcgggaagacgcatctgcgataacagaggaagat
ctgcttcaaataccgcgaggagtgcgaacactcgagggcctaaggctgaacacacgtgtg
ggaatccaatacttagccgcgtggttgacaggatcaggatctgtgccactctataaccta
atggaggacgcggctacggctgagataagccgtgtccagaactggcaatggatcaggtat
ggagtggaattggatggagacgggcttggagttcgggtgagtaaagagttgtttgggaga
gtagtggaagaagagatggaaagaattgagaaagaagttgggaaagaaaagttcaagaaa
agaatgtacaaggaagcttgcaagatgtttacaaagcagtgcactgcacctgagcttgac
gattttcttacacttgccgtctataatcacattgtcgctcaccaccctatcaatgtctca
aggctctga
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