Capsella rubella (pink shepherd's-purse): 17881239
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Entry
17881239 CDS
T02984
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
17881239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17881239
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
17881239
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
17881239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_2
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
17881239
NCBI-ProteinID:
XP_006288380
UniProt:
R0HC58
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MSDYSGEIYRYSPYSISDVAVASISQNPDERTGRNSTPDMAGGSNSQSSGERSDSSSTSV
SRKRQASSVSPTGISKKRSTMQMDLDILGCPICLGKLTIPIFQCENGHLACSSCCPKLMN
KCPSCALPIGHIRCRAMESVLSSISIPCPNTKFGCTEYVFYGLESTHEKECLFSPCPCPA
LGCDYTGSYRDVGYHYYTYVDTCLTPLHPYELFTYDKSSSVRMNISDKVKILVDKINNTL
FAVQCFREPYGVCVTVSCIAPSSPEMQTCSYHLSYTVDGHTMTYKSPGMKNVVEVSFQTP
LENFLFIPHSSLLGDLLEMKLYIGFH
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattattcgggagaaatatatagatatagtccttacagtatttctgacgttgct
gtagcctcgatctcgcaaaatcccgacgaaagaactggtcggaacagtactcctgacatg
gctggaggctcaaattcgcaaagttcgggagaaagatctgattccagtagtactagtgtc
tcacgaaagagacaagcttcttcggtttctcccactggtatttcgaagaaacgctcgacg
atgcagatggatcttgatattcttgggtgtcccatttgcttgggaaaactgaccattcct
atcttccagtgtgagaatggacatttggcatgctcttcttgctgtcccaaactgatgaat
aaatgtccatcatgtgctttgcctattggccacattcgctgcagagcaatggagagtgtt
cttagttcaatctctattccatgtccgaacaccaagtttggttgcaccgaatatgtcttt
tatgggttagaatcaactcatgaaaaggaatgcctcttctctccatgcccctgccctgca
ttgggctgtgattacactggctcatacagagatgtcggctatcactattatacatatgtt
gatacctgtctcactcccttgcatccatatgaattatttacgtatgataagtcctcaagt
gttcggatgaacattagtgataaggtaaaaatcctagttgataaaataaataacacactg
ttcgcggtgcagtgttttagggagccatatggtgtgtgtgtaacggtgagctgcattgcg
ccatcttctccagagatgcaaacttgctcatatcatctctcctacactgtggatggacac
actatgacttacaaatcaccaggcatgaagaatgttgttgaagtgagttttcaaacacct
ctagagaatttcttgtttatccctcactcttccttgctcggtgacttgttggagatgaag
ctttacatcggttttcattaa
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