Capsella rubella (pink shepherd's-purse): 17881396
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Entry
17881396 CDS
T02984
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00300
Lysine biosynthesis
crb00470
D-Amino acid metabolism
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb01230
Biosynthesis of amino acids
Module
crb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
17881396
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
17881396
Enzymes [BR:
crb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
17881396
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
17881396
NCBI-ProteinID:
XP_006287608
UniProt:
R0FF28
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MAAATQLLSQPSSLRVTLNQYQLNQTSLSRIPVLSLKSSLKPLKRLSVKAAAVSQNASKT
LAKESSAPSFDHCFKKSSDGFLYCEGTKVEDIMESVERRPFYLYSKPQITRNLEAYKEAL
EGVSSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLL
EDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNS
KFGIRNEKLQWFLDQVKAHPKELQLVGAHCHLGSTITKVDIFRDAAVLMVEYIDEIRRQG
FEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFV
NHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPPPPEAEVTKFDVVGPVCES
ADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSITKIRHAET
FDDHLRFFDGL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcaactcagcttctctcccaaccttcatctctccgtgtaactctgaaccaa
taccaattgaatcaaacctcactctccagaatcccagttttgtctcttaaatcctctttg
aagccacttaagcgcctctccgtgaaagccgccgccgtttcccaaaacgcctccaaaaca
ctcgcgaaggaatcttctgcgccttcgttcgatcactgcttcaagaaatcatcagatggg
ttcctctattgcgaaggaactaaggttgaggatatcatggagtctgtcgagagaagacct
ttttacttatacagcaagcctcagatcacaaggaacctcgaggcgtataaagaagcattg
gaaggagtgagttccgtcattggttacgctattaaggctaataacaatctcaagattttg
gagcatctcaggagtttgggctgtggtgctgtgctcgtcagtggaaatgagctcagactt
gctcttcgtgctggtttcgatcccacaaagtgcattttcaatggaaatggcaagttgttg
gaagatttagttctagctgctcaagaaggtgttttcgtgaatgtcgatagcgagtttgac
ttgaataatattgtggaagcttctagaatttctggtaagcaggtcaatgtactgctgcgt
atcaatcctgatgttgatcctcaggtgcatccgtatgtagctactgggaacaagaactca
aagtttggtatcaggaacgagaagcttcagtggtttctggatcaagtgaaagcacatccc
aaagagctgcagcttgttggagctcattgccatctaggctctaccattacaaaggtggat
atattcagagatgctgcggttcttatggtggaatacattgatgaaatacggcgccaaggc
tttgaagttagttacttgaacattggtggtggtttagggatagattattatcatgccggt
gctgtccttcctacacccatggatctcatcaacaccgtaagagagcttgttctttcacga
gacctgaatctaataatcgagccagggagatctctgattgcaaacacttgctgtttcgtc
aaccatgtaactggtgtgaagacgaatggaactaaaaacttcatagttattgatggaagt
atggctgagcttatccgtcccagtctttatgatgcttatcagcacattgaattggtctct
cctccaccgcctgaagccgaggttaccaaattcgatgtagtgggtcctgtctgtgaatct
gctgatttcttgggcaaagacagagagcttcccactcctccacagggagctggtctggta
gttcacgacgctggtgcatactgtatgagcatggcttccacttataatctcaagatgcgt
cctccggaatactgggttgaagaagatgggtcgatcactaagataaggcatgctgagaca
ttcgatgaccatttgcgtttctttgacggtctatga
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