Capsella rubella (pink shepherd's-purse): 17881446
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Entry
17881446 CDS
T02984
Name
(RefSeq) replication factor C subunit 1 isoform X2
KO
K10754
replication factor C subunit 1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03030
DNA replication
crb03410
Base excision repair
crb03420
Nucleotide excision repair
crb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
17881446
03410 Base excision repair
17881446
03420 Nucleotide excision repair
17881446
03430 Mismatch repair
17881446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crb03032
]
17881446
03400 DNA repair and recombination proteins [BR:
crb03400
]
17881446
DNA replication proteins [BR:
crb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
17881446
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
17881446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_19
AAA_30
RCF1-5-like_lid
Rad17
AAA_18
Gp44_lid
BRCT_2
nSTAND3
AAA_5
RuvB_N
AAA_14
AAA_28
Sigma54_activ_2
Zeta_toxin
NTPase_1
AAA_assoc_2
CAP59_mtransfer
TsaE
Motif
Other DBs
NCBI-GeneID:
17881446
NCBI-ProteinID:
XP_006287008
UniProt:
R0FDH7
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MSDIRKWFMKAHDKGNGSAPKSTGAVKNAAETAPIKPEQASEDLDTAARRKTSKYFGKDK
TKVKDEKEVEELPAKRKLKTESDDLSKARPRKVTKVDDDDDDFDVPISRKTRDSTPSKKL
KSGSGRGIASKTVEKDEDDDGEDAHEKETPLKSGGRGRGGRAASGASTGGRGRGGGRGGF
MNFGERKDPPHKGEKEVPEGTPDCLAGVTFVISGTLDSLEREEAEDLIKRHGGRITGSVS
KKTTYLLCDEDIGGKKSEKAKELGTKFLTEDGLFDMIRSSKPVKKSLPERTNKGTEKVCA
PPKISPQKEETRGKPVAKISPTKAPPAKGKKIIETSLPWTEKYRPKVPNEIVGNQSLVTQ
IHNWLSHWHDQFGGTGSKGKGKKVNDAGARKAILLSGTPGIGKTTSAKLVSKMLGFQAVE
VNASDSRGKANSNIAKGIGGSNANTVKELVNNEAMAANLDRSKHLKTVLIMDEVDGMSAG
DRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNFRKPTKQQMAKRLMHIAK
VEGLEVNEIALEELAERVNGDIRLAVNQLQYMSLSMSVIKYDDIRQRLLSSAKDEDMSPF
TAVDKLFSYNGGKLRMDERIDLSMSDPDLVPLLIQENYLNYRPAGKDETKRMELLARAAE
SIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSREIFEQGERNFNRFGGWLGKN
STAGKNRRLMEDLHVHVLASRESSSGRETLRVDYLPLLRNRLTSPLQTLPKDEAVSEVVD
FMNSYSISQEDFDTIMELGKFKGHENPMEGVPPPVKAALTKKYNETNKTRMVRVADMVQL
PGMKKAPKKRIAAMLEPTVDSLRDEDGEPLAENEEENASDAEEDSEEANDGEKLESNLKN
LNARGIQVELDLKGAGSSGSRKAAGRGRGRGKTAEASTEKKATGRGSGAKRKR
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatattaggaagtggtttatgaaagcccatgataaaggaaatggaagtgctccg
aaatcgacaggtgctgtgaagaatgctgcagagactgcacccattaaaccagagcaggct
agcgaagacctggatactgctgctagaagaaaaacgagcaagtattttggtaaggataaa
acaaaagttaaagatgagaaagaggtggaagaattacctgccaagaggaaacttaagact
gagtctgatgatttaagcaaggcccgcccaagaaaggttaccaaggttgatgatgacgat
gatgattttgatgtacctatttcaaggaagactcgtgatagcactcccagcaaaaaacta
aagtcggggtcaggtagaggaatcgcaagtaaaactgttgagaaagacgaggatgatgat
ggtgaagatgcccacgaaaaggagactcctcttaaatcaggtggaagaggccgtggcggt
agagctgcatcaggggcctcaactggtggaagagggagaggtggagggcgaggtgggttt
atgaattttggtgaaaggaaagacccaccgcataaaggagaaaaggaagttcctgaaggc
acccctgattgcttagctggagtgacatttgtaattagtggaacacttgatagtttagaa
agagaagaagcagaagatcttataaagcggcatggtggtcgtataacaggctctgttagc
aagaaaacgacttaccttttgtgtgatgaagatatcggcggaaagaaatctgaaaaagct
aaagagctgggcactaagtttcttacagaggatggcctgttcgacatgatccggtcctct
aaacccgtgaaaaagtctttgcctgaaaggactaacaaaggcactgaaaaagtctgtgca
ccaccaaagataagtcctcagaaagaagagacaagaggaaagcctgtagcaaaaatttcg
cccaccaaggctcccccggcgaaaggaaaaaagatcatcgagacttccttgccatggaca
gaaaaatacagaccaaaagtaccaaatgagattgttgggaatcagtcactggttactcag
attcacaactggctgtcccactggcatgatcaatttggaggtactggaagcaaaggaaag
gggaagaaagtgaatgatgctggtgccaggaaggctatactcttgagtggaacacctggt
attggaaaaacaacatcagcaaagttagttagtaagatgcttggttttcaagcagttgag
gttaatgctagtgacagtcgtggaaaggcgaactcgaatattgccaaaggtattggtggt
agtaatgcaaatactgtgaaagaacttgtcaataacgaagccatggcggctaacttggat
aggtcaaagcacctgaagactgttctaatcatggatgaagtagatggaatgtctgcaggc
gacaggggaggtgttgcggatcttatagctagcattaaaatatcaaagattcctattatc
tgcatttgtaatgaccgatacagtcagaaattgaagagtttagtaaactactgtcttccc
ctcaatttccggaagcccacaaaacagcagatggcaaaacggctgatgcatattgccaag
gtagaaggccttgaagttaatgaaattgccctggaagaactcgctgagagagtgaatggg
gacatacgattggccgtaaatcagctccaatatatgagcctgtccatgtcagtcatcaag
tacgatgatatcaggcagcgcctgctaagcagtgctaaggatgaagatatgtcccctttc
acagctgttgacaagttgtttagttataatggtgggaagctgagaatggatgaacgaatt
gacctaagcatgagtgatcctgatttggttcctctacttatacaggaaaactatctcaat
tataggccagccggtaaagacgagacaaaacgaatggagttacttgctcgtgctgctgaa
tctattgcagatggagatatcatcaacgtgcagattcgaagatacaggcaatggcaactt
tctcagtcatgctgtgttgcatcttctattctcccagcttcattgttgcatggatcaagg
gagatattcgagcagggagagcgtaatttcaatagatttggtgggtggcttggcaagaat
tctactgcggggaaaaatagacggttaatggaggatctgcatgttcatgtccttgcttct
cgtgaatccagctctggaagggagactcttcgtgttgattatcttcctcttctccgaaat
cgcttgactagcccacttcagacactgcctaaggatgaagctgtttcagaagttgttgat
ttcatgaactcctactctataagccaggaggactttgatactattatggagttgggaaaa
tttaagggacatgaaaatccgatggagggtgttccacctccagttaaagcagctttgacc
aaaaaatataatgagacgaataaaaccagaatggtacgtgttgctgacatggtgcagctt
ccgggaatgaagaaggcccctaagaagcgaatagctgcaatgctggaaccaactgttgat
agtttgagagatgaggatggcgagccattagcagaaaatgaagaagaaaatgcgtcagac
gctgaagaagactcagaagaagcaaacgatggagaaaagctagagtcaaatctaaaaaat
ctgaatgctagagggatccaagttgaattggatttgaagggagctggaagctctggttca
agaaaggccgctggtagaggcagaggaagaggcaaaacagctgaggcgtctactgagaag
aaagctacaggaagaggctctggtgccaagagaaagagataa
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integrated database retrieval system
