Capsella rubella (pink shepherd's-purse): 17881484
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Entry
17881484 CDS
T02984
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17881484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17881484
03036 Chromosome and associated proteins [BR:
crb03036
]
17881484
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
17881484
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
17881484
PBAF complex
17881484
GBAF(ncBAF) complex
17881484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
B1
YEATS
Motif
Other DBs
NCBI-GeneID:
17881484
NCBI-ProteinID:
XP_006287460
UniProt:
R0GTZ5
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSGNNNNPQKPQGSGSAPSPFGNPGMASASVPGNQGFAPSHMTANFQAQFQFSQAQALAQ
AQAQSKVQAQLQAQLQAQGMTMNQAQGSPGIGGLGPSSPSLTTPGSLNMKRFQQKPPMRP
PGASAGNNTISPMRTMELTPAARKKKQKLPEKSLQERVAAILPESALYTQLLEFESRVDA
ALTRKKVDIQEALKNPPCIQKTLRIYVFNSFANQNNTIPGNPNADPPTWTLKIIGRILED
GVDPDQPGFVQKSNPLHPKFSSFFKRVTVSLDQRLYPENPLIIWENARSPAPQEGFEIKR
KGNQEFAASIRLEMNYVPEKFKLSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDP
SFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPPIHLEHKIKLSGNNPAISACYDVLV
DVPFPIQRDLNNLLANAEKNKEIEACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINA
LIESQSKDLKVVAGEASRNAERERRSDFFNQPWVEDAVIRYLNRRPAAGNEGPGSW
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaacaacaacaatccacagaagcctcaaggctctggctctgcgccatcacct
tttgggaatcctgggatggcctctgcatcggttcctggaaaccaaggctttgctccgtct
cacatgacagctaactttcaagctcagtttcagttctcacaagctcaggccctagctcaa
gctcaagcacagtctaaagttcaagcacaactgcaagctcagctacaagctcaaggcatg
accatgaaccaagcacaaggttctcccggtattggtgggttgggtccatcttctccttct
ttgacgactcctgggagtttaaatatgaagaggttccagcagaaacccccgatgcgacct
cctggtgcttctgcgggtaacaacactatctcccccatgagaacaatggagttaactcct
gctgctcggaagaagaagcagaagcttccagaaaagtcattgcaggagcgggttgcagca
atcttgcccgagtctgccctatacactcaacttctggagtttgagtctcgggtcgatgct
gcactaacgaggaagaaagttgatatccaggaagcccttaaaaatcctccctgcatacag
aagactcttaggatctacgttttcaactcatttgctaaccaaaacaacacaatccctgga
aatcctaacgctgacccgccaacatggactcttaaaattattggtaggatcctcgaagat
ggggtagatcccgaccagccaggatttgttcagaaatcaaacccattgcatcccaaattc
tcgtctttcttcaaaagggttacagtttccctggatcagaggctatatcctgagaaccca
ttgatcatatgggagaatgctcgatcacctgctcctcaggaagggtttgagataaagagg
aaagggaatcaggagtttgcagctagtatacggctggagatgaactacgtccctgaaaag
ttcaagctttctactgcattgatggatgttctcgggattgaggttgaaacccgcccaaga
atcatcgctgcaatttggcattatgttaaggcgaggaaattgcagaacccaaatgacccc
tctttcttcaattgtgacgctgcacttcagaaagtttttggtgaagaaaagttgaaattc
actatggtctctcagaagatatctcatcacttgtcgcctccaccgccgattcacttagaa
cacaaaatcaagctctcaggaaataatccggccatatcagcatgctacgatgtcctagtg
gatgtacccttcccaatccagagggatctgaacaatttgttagccaacgcagagaagaac
aaagagattgaggcttgtgatgaagcaatatgtgcagccataaggaaaattcatgagcat
aggaggaggcgggcatttttcttggggttcagccagtcgccagttgaattcataaacgcc
ctgatcgaatctcagagcaaggatctgaaggtcgtagcgggagaagccagtcgaaatgct
gagagagaacgtcgatcggacttcttcaaccaaccttgggtcgaagatgcagttattcgg
tacttaaaccggaggccagcagctgggaacgagggaccagggagttggtga
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