Capsella rubella (pink shepherd's-purse): 17881610
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Entry
17881610 CDS
T02984
Name
(RefSeq) mRNA-decapping enzyme subunit 2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
17881610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17881610
Enzymes [BR:
crb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
17881610
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
17881610
mRNA degradation factors
5'-3' decay
Decapping complex
17881610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
DUF226
Motif
Other DBs
NCBI-GeneID:
17881610
NCBI-ProteinID:
XP_006288001
UniProt:
R0GVH0
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MSGLRRSSSSSKNIGNCLPSKELLDDLCSRFVLNVPEEDQQSFERILFLVEYAYWYYEDN
AVENDPKLKSLSLKEFTSLLFNSCDVLRPYVTHIDDIFKDFTSYKCRVPVTGAIILDETY
ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSKLLKKEEYIEFVFRQQ
RVRLYIVAGVTEDTVFAPQTKKEISEIAWHRLDHLQPANNEVISHGVSGLKLYMVAPFLS
SLKSWILKHPSPVARRPNKPLKALCVWNAKTSVGGNGTAIVESHNRKPELKTTTVESHNR
KPELKTTTIESHNAKPELRTATTESHNAMPEVDHSQDVVAQSSFTSFKFDMSAIRQAIES
GFSA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtctccgtcgatcgtcgagttcatcgaagaacatcggtaattgcctcccttcc
aaggaacttcttgatgatctctgcagtcgatttgttttgaatgttcctgaagaagatcaa
cagtcattcgagagaattttgtttctggtggagtatgcttattggtactatgaagataat
gctgttgagaatgatccaaagcttaagtccttgtctttgaaagagtttacttcgctctta
ttcaacagctgtgatgtgttgagaccttatgttactcacatcgatgacatatttaaagac
ttcacttcttacaagtgtcgagttcccgtcactggggctattatcctggatgagacatat
gaacggtgcttgttggtgaagggatggaaaggatcgagctggagctttccccgcgggaag
aagagcaaggatgaagaagaccatgcttgtgccatccgtgaggtcttagaagaaactgga
tttgatgtctcaaaactcctcaagaaagaagaatatatagagtttgtattcagacagcaa
agagtacgactatacatagttgctggggtgacagaggatacagtttttgcaccacagaca
aagaaggaaatcagtgaaatcgcatggcatcggcttgatcatcttcagccagcaaataat
gaggtgatatctcatggagtttctggcctcaaattgtacatggtggcaccttttctttcg
tcattgaagtcgtggatattaaaacatccatcacctgtagcacggagacctaacaagccc
ctaaaagcactctgcgtgtggaatgcaaagactagtgttggagggaacgggacagcaata
gtggaaagccacaatagaaaacctgaactcaagacaacaacagtggaaagccacaataga
aaacctgaactcaagacaacaacaattgaaagccacaatgcaaagcctgaactcaggaca
gcaacaacggaaagccacaatgcaatgcctgaagtcgaccattctcaagatgtagtcgct
caaagcagtttcacgagcttcaagtttgacatgtcagctatcagacaggcgatagaatct
ggtttttcagcttga
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