Capsella rubella (pink shepherd's-purse): 17881716
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Entry
17881716 CDS
T02984
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
17881716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17881716
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
17881716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_VPS8
NBCH_WD40
WD40_RFWD3
Beta-prop_LRRK2
MIOS_WD40
VID27
Motif
Other DBs
NCBI-GeneID:
17881716
NCBI-ProteinID:
XP_006287020
UniProt:
R0H8L1
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAFQIYNCAKLNLVIISPQLPKKIR
ALASYRDYTFAAFGNEIAVFRRAHQVATWSKHVAKVDLLLLFGEHVLSLDVEGNMFIWAF
KGIEEHLAPIGNLQLTGKFTPSSIVHPDTYLNKVLVGSQEGPLQLWNINTKKMLYEFKGW
GSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFSTDGRPLL
ASGGSFGVISIWNLSKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTN
DSDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSVIQEQQSRELSQRHISRR
AKKLRLKDEELKLKPVVSFDCAEIRERDWCNVITCHMDTAEAYVWRLQNFVLGEHILKPC
PENPTPVKACAISACGNFAVVGTAGGWIERFNLQSGISRGSYFDMSDNRRYAHDGEVIGV
ACDSTNTLMISAGYHGDIKVWDFKKRELKSRWDVGCSLVKIVYHRVNGLLATVADDFVIR
LYDVVTIKMVREFRGHTDRVTDLCFSEDGKWLLSSSMDGSLRIWDVILAKQIDGVHVDVP
ITALSLSPNMDVLATAHSDQNGVYLWVNQSMFSGLPSVDSYASGKDVVNVKLPSVSALTS
SEADEDMEKQVLENSGAQQASSFSISHKQIPELVTLSLLPKSQWQSLINLDIIKARNKPI
EPPKKPEKAPFFLPSIPSLSGDILFKSNDSEADGENEEKNKKDHNSMKNFDALESPFSKL
LKSSWDSKHFLDFTNYLKSLSPSALDMELRMLEIIDEEDTEEELIKRHEFISIGQLLDYF
INEISCKNDFEFMQAVVKLFLKIHGETIRCHPSLQEKAKTLLETQSLVWQKMEKLFQSTR
CIVTFLSNSQF
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcttcgaaccgtttagagcaattggttacataacgagtacggttccgttctcc
gtccagcgattaggaaccgagacctttgtcaccgtcagcgttggcaaagcttttcagatt
tataattgcgccaagctcaatcttgtcattatcagtcctcaactcccaaagaagattaga
gctctagcttcttaccgcgactacacttttgctgcttttggtaatgaaatcgctgtcttt
aggcgtgctcatcaggtagctacttggagcaaacatgttgctaaagttgacctgctactg
ttgtttggagaacatgtgctaagtcttgatgttgagggaaatatgtttatatgggcattc
aagggaatagaagaacatctagctccgattggaaatcttcagcttactggaaagtttacc
ccgagctctattgttcacccagatacttatttgaacaaggttcttgtagggagccaagaa
ggtccgttgcagctatggaacataaatactaagaagatgctctatgagtttaagggttgg
ggttcatctgtcaccagttgtgtttcgtcccctgccctggatgttgttgccattggttgt
gctgatggaaagatccatgtgcataacataaagttggacgaagagatcgtaaccttcgaa
catgcctcgcgaggtgctgttactgctttgtctttcagtacagatggacgtccccttctt
gcgtctggaggttcctttggtgtcataagcatctggaatcttagcaaaaagagacttcag
tcagtcattagagatgcacatgacagttcgataatctcattgaactttttagcaaatgag
cccgtgctaatgagtgcatcggcagataactcactcaaaatgtggatctttgacacaaat
gattctgatcctcgcctattacgcttccgctcggggcatagtgctccccctttgtgtatc
aggttctactctaatggacggcatatattgtctgctggacaggatcgtgccttccgcctg
ttctctgtcatccaagagcaacaaagtagagagctttctcaaagacacatatccaggcga
gccaaaaaactccgactgaaggacgaagagctgaagttgaagcctgttgtttcatttgat
tgcgctgaaattagggagcgtgattggtgcaatgttattacttgccatatggatacagca
gaagcatatgtatggagacttcagaactttgttcttggagagcatatcctcaaaccatgc
cctgagaatccaactccagtcaaggcatgtgcaattagcgcctgtggaaactttgcagta
gtcggaacagcgggtggatggattgagagatttaacctccaatctggaatcagccggggt
agttacttcgatatgtcagataacagaaggtacgcccatgatggtgaagttatcggagtt
gcttgtgactccacaaacacactcatgataagtgcaggatatcatggggacataaaggtt
tgggatttcaaaaagcgggaattaaagtccaggtgggatgttggatgttcattagttaaa
attgtctaccaccgtgtaaatggtcttttggctacggtggcagatgattttgttatccgt
ttgtatgatgttgtgacaataaagatggttcgtgaatttagaggtcatacagaccgtgtc
acggatttgtgctttagtgaggatggcaagtggctcctctcatcgagcatggatggaagt
cttagaatttgggatgtcatattggcaaagcagattgatggagtgcatgttgatgtacca
ataacagcattgtctttatcaccaaatatggacgttttggcaactgctcactctgatcag
aacggggtctacttgtgggttaaccaatccatgttctctgggcttccaagtgttgattct
tatgctagtgggaaagatgttgtaaatgttaaattgccttcagtctctgcactaacatct
tctgaagctgatgaggatatggagaagcaagttctagaaaattctggggcacaacaagct
agcagtttctcaatttcccataagcagatcccagaacttgttactctgtctctattgcca
aaaagccaatggcagagtttgatcaacctggatataataaaggcccggaataaaccaata
gagcctccgaaaaaacccgaaaaggctccttttttcttgccctcaattccctcactttct
ggagatatattattcaagtcaaatgactctgaagctgatggggagaatgaggaaaagaat
aaaaaggaccataatagcatgaagaactttgatgcattggaatctccattctcaaagctt
ctaaaatcctcatgggattcaaaacactttttagattttaccaactacttgaagagttta
tccccgtcggctctcgatatggagctaagaatgcttgaaattatagatgaagaagatact
gaagaagagcttatcaaaagacatgagtttatatcgattgggcaactgctggattacttc
atcaacgagatctcttgcaaaaacgactttgagtttatgcaggcggtggtgaaattattt
ctgaagatccacggtgagaccataaggtgccacccaagtttacaagagaaggcgaagaca
cttttagaaactcagagtttggtgtggcagaaaatggagaagcttttccagagcacaaga
tgcatagttaccttccttagcaattcacagttttga
DBGET
integrated database retrieval system
