Capsella rubella (pink shepherd's-purse): 17881823
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Entry
17881823 CDS
T02984
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17881823
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
17881823
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
17881823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_11
zf-C3HC4_2
DUF4200
zf-RING_16
RINGv
zf-C3HC4_3
TraC
FIMAH
zf_RING_Vps8
zf-UDP
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
17881823
NCBI-ProteinID:
XP_006287558
UniProt:
R0FEX4
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MAEENAAGNAICSICYEDLKPVVENLQSISACGHVFHELCLQQWFEYCPSTNKRNCPICK
QRCSLKDPCRLYFQSSGDQMDSIASKKTVEIEEDPVLLRGEVKRLEGKVHNLTSVLEKQK
KDNAQVSDKLHQCNEQLKEDKVKRWEALQEISTTQHLLKLKSEECIQLTSQCAKLQERTM
ALAKELAALKLVSDLSLEEDDVLKLALLGNTAKTKDTIDTLVKSLVIRNRSYKELLAKCN
QLGRGEARSSEKLEKALEKIEKLKKRMRELEMITEERENRALRSIKASMNCSEREVYEPP
TESLASFRMRPSDNMVENISPPLSKLEKNDGFTNHGSCLSGREGFFISRSTDSVIDLDDD
VPENNICGIRHSDTNVEEKCDNPIVRDVKFNIRKDSTSAVSPGSNGAGNIWSSSGTNRNL
GRWSKHGERNEATTTLGGSVPSKDDLIAIGPDGKGGRVKVLRSKPQISSANASSGSGKRF
KLGTKTSGSSSQGCLQIEHYFGKPNR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaaaacgcggcgggtaatgctatttgttcaatctgctacgaagatctcaaa
ccggttgttgagaatcttcaatcgatctccgcttgtggccacgtctttcacgaactttgt
ttgcagcaatggttcgagtactgcccgagtacgaacaagcgaaattgtccgatttgtaag
cagaggtgctctctaaaggatccatgtcgactttattttcagtcttctggggatcaaatg
gattcgattgcctctaagaagacagtcgaaatcgaggaagatccggtgttattgagaggt
gaagtgaagcgtctcgaagggaaggttcataatcttacttctgttctggagaagcagaaa
aaggacaatgctcaagtctctgataagttgcatcaatgcaatgagcaattgaaagaggat
aaagtaaaaaggtgggaggctctgcaagaaatatcaacgactcaacacttgcttaagttg
aaatctgaggaatgcatccagcttacttcacagtgtgctaagctacaggagagaactatg
gctcttgccaaggagctcgcagcacttaaattggtttctgatctaagcttggaggaagat
gatgtcctgaagttagccttgttggggaataccgctaagacaaaagatacaatagacaca
ctagtcaagtccttggttatccgaaataggagttataaggaattgttagcaaagtgcaat
cagctgggcagaggcgaagctcgatcttctgagaaactagaaaaagctctggaaaagata
gagaaattaaagaagcgaatgagggaacttgagatgattactgaagagcgagagaacaga
gctctaaggagtataaaagcttcaatgaattgcagtgagagagaagtttacgagcctcca
actgagagcttggcttctttcagaatgcgtccatctgacaacatggttgagaacatctct
ccaccattaagtaaattagagaagaatgatggcttcacgaatcacggatcatgcttaagc
ggaagagaaggcttcttcattagtagaagtacggactctgttatcgatttagatgatgat
gttcctgaaaacaacatttgtggcatcagacactcagatactaatgttgaagagaaatgt
gataatcccattgtgagggatgtgaagttcaacatcagaaaagactcgacatcagcagtc
tcacctggcagcaatggtgctggaaacatttggtcatcaagtggaacaaatcgaaacctt
ggtcgttggagcaaacatggagagagaaacgaagcaactacaacactaggaggttctgtt
ccaagcaaagatgatctgatcgctattggacctgatggtaaaggtggaagagtcaaagtg
ctgagatctaaaccccaaatttctagcgccaatgcgagctcaggaagtggtaagagattc
aagcttggaactaaaacaagtggttcgtcctctcaaggttgtctgcagattgaacactat
tttggaaaacctaatcgctaa
DBGET
integrated database retrieval system
