Capsella rubella (pink shepherd's-purse): 17881970
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Entry
17881970 CDS
T02984
Name
(RefSeq) peroxisome biogenesis protein 1
KO
K13338
peroxin-1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
17881970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17881970
Membrane trafficking [BR:
crb04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
17881970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
NPHP3_N
AAA_5
AAA_22
nSTAND3
RuvB_N
NACHT
ATPase_2
AAA_19
AAA_14
Mg_chelatase
Bac_DnaA
RNA_helicase
IstB_IS21
AAA_30
AAA_7
AAA_18
AAA_2
AAA_11
AAA_24
NB-ARC
AAA_28
ORC-CDC6-like
ATPase
DEAD
Zeta_toxin
ABC_tran
Sigma54_activat
FtsK_SpoIIIE
KTI12
MCM
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-GeneID:
17881970
NCBI-ProteinID:
XP_006286937
UniProt:
R0H531
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
METEAVVRTVAGVDCFVSLPRQLLHALQSTSSSPLPPLLPVELRSGDRRWSVAWSGSTSS
STAIEVARVFAESISLPDGTVVQVRVLPNVPKATLVTVEPDTEDDWEVLELNAELAEAAI
LSQVRLLHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLNAKK
SPDAFSPGKECSNLKVLLRVQDTDESVFHQADVKGFELRVALTSIAYIHPETAKKYFLES
LQLISVSPRIPLQGSAKKDEALNMKNSEASKVAENGTPSEKKEPRRAILRLVFSDLAAKG
HLMMSESLRLYLGAGLHSWVYLRGCNVNVDKEIPALALSPCVFKIPEKEKVLNRSADMLG
NHNSVRKGSHPPSGLSTSMDVFDWSVHDKVVTALSSEGVHEKGNQDNVYQVKNKKGLECL
TRLWSLAQLDAISSVAGVDVSSLVVGRETFFHFEVRGLKSDKSRDRQSSGNDRWESGKKH
KNTPLQILYVMTVSDESLLGDKFAVYELSLDRSEKRDNVVHIEPVLEKMNFDGPRYLTTS
RKDTHFNKGVSPDISSLTWMGPIVLDVIKRMTVLLSPAAGMWFSKFSIPSPGHILIYGPP
GSGKTILARAAAKYFEEQKDLLAHVILLSCSALALEKVQHIHQVLSSVIAEGLEHAPSVI
ILDDLDSIISSSSDTEGAQASVGVTMLTKFLTDVIDDYGEYRNFSCGIGPLAFVASVQSL
DQIPQTLSSSGRFDFHVQLAAPATLERGAILKHEIQKRLLNCSEDILLDLAAKCEGYDAY
DLEILVDRAVHAAIGRHLPCESNLSKYTLVKEDFTRAMHEFVPVAMRDITKSASEGGRLG
WEDVGGVTDIKNAIKEMIELPSKYPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAAC
SLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTD
RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILT
VLSRKLPMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEFLNREDEPETGSTPIIT
DPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKSSREAKGKRATLA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggaagcggtggttcgtaccgtcgccggcgtagactgttttgtctcattacct
cgtcagctactccatgcgcttcaatccactagctcctctcctcttcctccgcttctccct
gtcgagctacgctccggtgaccgccgttggtcagtagcttggtccggctccacctcctcc
tccactgcgatcgaggtcgctcgagtctttgcggaaagcatttcgttgccggatggtaca
gttgttcaagttcgtgttctccctaatgtgcccaaggctactttagtaacagtcgaacca
gacactgaagatgactgggaagttcttgagctcaatgcagaacttgccgaggcagctata
cttagtcaggtgaggctactgcacgagaccatgaaattccctttgtggttgcatgaccga
actgtgataagattttctgtggtttcaacatttccatcaaaaggggtggtacaacttgtg
ccaggaactgaagtggctgtggctccaaagagacgtgacagaaacctcaatgcaaaaaag
agtcctgatgcgttttctccaggaaaagaatgtagcaatctgaaggttctattacgtgta
caagatactgatgaatcagtctttcatcaagctgatgtcaaaggttttgagctaagggta
gccctcacttccattgcctatattcatcctgaaactgccaagaaatactttctagaatct
cttcagttgatttctgtatcccctagaatacctttgcaaggtagtgcaaaaaaggacgaa
gccttaaatatgaaaaacagtgaagcttcaaaggtggccgaaaatggcactccaagcgaa
aagaaagagcctcgtcgagcgattcttcgccttgtcttttcagatttagctgctaaagga
catctaatgatgtccgaatctcttcgtctctatctaggagcaggcctacactcatgggtt
tacttaaggggatgcaatgtaaatgtggacaaagaaattcctgctcttgcactttctcct
tgcgtcttcaagattcctgaaaaggaaaaggtgctaaatagaagtgcagatatgcttggt
aatcataattctgtcaggaaaggcagtcatccaccttctggcttgagcacctctatggat
gtttttgactggtctgtgcatgataaggttgttacagctctttcatctgagggtgtgcat
gaaaaaggaaatcaagataatgtctatcaagttaagaataaaaaaggattggaatgcctt
actcgcttgtggtcattggcacaacttgatgctatttcatcagttgcaggagttgatgtt
agttcgttagttgtaggaagagaaacgtttttccattttgaagtaagagggctcaaatct
gataaatcaagagatagacagtcttctggtaatgatcgttgggaaagtggaaagaagcat
aaaaacactcctttacaaattttgtacgtcatgacggtctctgacgagtctttgcttggt
gataaatttgctgtgtatgagcttagcctggatagaagtgagaagagggacaatgtggtg
catattgagccagtacttgagaagatgaattttgatggcccgagatatttgacgacgtct
cgtaaagatacacacttcaataaaggagtttccccggatatatcttccttgacgtggatg
ggcccaattgtgctggatgttatcaagcggatgaccgtgttgttgtctcctgcagccgga
atgtggtttagcaagttcagtattccatcacctggacatattctcatatatggcccccct
ggttcaggaaagacaatattggcaagagctgctgcaaagtacttcgaagaacagaaggac
ttgttggcacatgtgattctgctatcctgttctgcacttgccttagagaaggttcaacac
atccatcaagtcctgtctagtgtaatagctgagggcttggaacatgcaccatctgtcatc
attttggatgatcttgatagcattatttcatcgtcttcagatactgaaggagcacaagct
tcggttggggttacgatgcttacaaaattcctaacagatgtcatagatgattatggggaa
tacaggaatttctcttgtggaattggtccacttgcatttgttgcttctgtccagtctcta
gaccaaattccacagacattgagctcatcaggaaggtttgactttcatgtgcaactggct
gctcctgctaccttggaacgtggggccatactgaagcacgagatacagaaacgcctttta
aactgttcagaagacatactacttgacttagctgctaaatgtgaaggatatgatgcgtat
gacctggaaatattggttgatagagctgttcatgctgcaattggccggcatctaccttgt
gaatcaaatctttccaagtatactttggtcaaagaagacttcactcgagctatgcatgaa
tttgtgcctgttgccatgcgtgacatcacaaaatctgcctctgaaggtggtcgtttgggg
tgggaagatgtgggaggtgtgactgatattaaaaatgctatcaaagagatgattgagttg
ccatcaaaatatccgaaaatctttgcaaaatctcctctgcgtttgagatcgaatgttctc
ttgtatggccctcctggttgtgggaagactcacattgttggcgcagctgctgcagcgtgt
tccctacggtttatatcggtgaaggggcccgagctgttaaacaaatacattggtgcatct
gaacaagcggtccgtgatatattttcaaaagcagcagcggcagcaccgtgcatactcttt
ttcgatgaattcgattcaattgctccgaagagaggacatgacaacaccggagtaactgat
cgagttgttaatcaatttctgacagaactagatggagttgaagttctaaccggggtcttt
gtttttgctgcaacgagtcgaccagatttacttgatcctgcactcctaaggcctggccgg
cttgatcgtcttcttttgtgcgactttccttccccaccagaacgattagagattcttaca
gttctttctagaaagcttccgatggctgatgatattgacttagaacctatagctctgatg
actgaaggcttcagtggagctgatcttcaagctcttctctcagatgcacaacttgcggct
gttcacgagtttctgaacagagaagatgaacccgaaaccggaagtacgccaataataacc
gatcctcttctgaagtcgatcgcttctaaaacgaagccctcggtttctgaaaccgagaag
caaaagctctatgacatatatagccagtttctggattcaagaaaatcgtcgagggaagca
aagggcaaaagagcaaccttagcataa
DBGET
integrated database retrieval system
