Capsella rubella (pink shepherd's-purse): 17881996
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Entry
17881996 CDS
T02984
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
17881996
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crb01007
]
17881996
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17881996
Enzymes [BR:
crb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
17881996
Amino acid related enzymes [BR:
crb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
17881996
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
17881996
Prokaryotic type
17881996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
17881996
NCBI-ProteinID:
XP_006289423
UniProt:
R0FJN7
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MLLRLTARSIRRYTSSSTSSPLPALFSSASSFCTVPSMAANHPKDEAYLSAVIPKRIRLF
EQIQANQLENLKSMPHDPIKITLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVND
VLWDMSRPLEGDCKLELFKFDSDKGRDTLWHSSAHILGQALEQEYGCQLCIGPCTTRGEG
FYYDGFYGDLGLSDNHFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENNFKVEIIND
LPADKTITVYRCGPLVDLCRGPHIPNTSFVKAFKCLRASSAYWRGSKDRESLQRVYGISY
PDQKQLKKYLQFLEEAKKYDHRLLGQKQELFFSHHLSPGSYFFLPLGTRVYNKLMDFIKK
QYWQRGYTEVISPNMYNMSLWETSGHADNYKDNMFTFDIEKQEFGLKPMNCPGHCLIFQH
RVRSYRELPIRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKEEVKGVLEF
IDYVYKIFGFTYELKLSTRPEKYLGTLETWDKAEEDLKEAIEAFGKPLVLNEGDGAFYGP
KIDITVSDAMNRKFQCATLQLDFQLPERFKLEYAAEDEAKRGRPVMIHRAVLGSVERMFA
ILLEHYKGKWPFWISPRQAIVCPISEKSQKYAEKVQKQIHDAGFYVDADLTDRKIDKKVR
EAQLAQYNYILVVGETEAATGQVSVRLRDSAAHSVKSIEDLLEEFKSKTAEFV
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgctccttcgtcttacggctcgctctattcgtcgttacacctcttcttctacttcgtct
cctctaccagctctcttctcttctgcgtcttcgttttgtactgttccatcaatggcagct
aatcatccaaaggatgaggcgtatctatccgccgtcatccccaaacgtatcaggctcttc
gagcagatccaagctaatcagctcgagaatcttaagtctatgccgcacgatccgatcaag
attactttgccagatgggaatgtgaaagaagggaagaagtgggagacaactccaatggat
atcgctgctcagatttcaaagggtttggctaattctgcactgatttcagcggtcaatgat
gttctttgggatatgagtaggccattggaaggtgattgtaagcttgagcttttcaaattt
gatagcgataaaggtcgcgacactctctggcattctagtgcacacattcttggtcaggct
ctcgagcaggagtatgggtgtcagctatgcataggaccatgtacaacgagaggagagggt
ttctactatgatggattttatggtgacttgggcctgagcgacaatcactttcctagcatc
gaagcaggtgctgcaaaagctgctaaggaagcacaaccatttgaaaggattgaagtgact
aaggatcaagcactcgagatgttttctgagaataattttaaggttgaaatcatcaatgat
ttgcctgcggacaagaccattactgtctacagatgtggtccattggtggatttgtgtcgt
ggaccgcacataccaaacacttcctttgtgaaagcgttcaagtgtttgagggcctcatca
gcttactggaggggtagcaaagaccgtgagagcttgcagagagtttatgggatatcttat
cctgatcagaagcagctgaagaaatatcttcaatttctggaagaagccaaaaagtatgac
catagactattgggccaaaagcaggaactcttctttagtcatcatctcagccctggaagt
tatttcttccttccactcggcactcgtgtatataacaagctgatggacttcattaaaaag
caatactggcaaaggggttacacagaggtcatttcaccaaatatgtacaacatgagtctg
tgggaaacatccggacacgccgacaattacaaggataatatgttcacgtttgatattgag
aagcaagagtttgggctcaaacctatgaattgtcctggtcactgcttgatattccaacat
cgggttcgttcatatagagagttacctatcagactggccgactttggagtgttacaccgc
aatgaggcaagtggagcacttagtgggttgacacgtgtccgacggttccagcaggatgac
gcacacatattctgtacaacggaacaggttaaggaagaagtgaagggtgttttggagttt
attgactatgtgtacaaaatttttgggttcacctatgagctaaaactttccacgaggcca
gagaagtaccttggaactttggaaacatgggataaagctgaagaggatctcaaagaagct
atagaagcttttggaaagccattagtgttgaacgaaggagatggggcattttatggccca
aagatagacatcacagtttctgatgcaatgaatagaaaattccagtgtgctactttacag
cttgattttcaacttccggaacgcttcaaactggaatacgcagctgaggacgaagcgaag
aggggtagacctgtaatgatacatagagccgtgttgggatctgtggaacgtatgtttgcc
atattgttggagcattacaaaggaaaatggcccttctggattagtccacgccaagccata
gtttgccctatatcagagaaatctcagaaatatgcagaaaaggtgcaaaagcaaattcat
gatgctgggttctatgttgatgccgacttaacagacagaaagatcgacaaaaaggtgcga
gaagctcagcttgcacagtacaactacatccttgtcgtgggtgaaactgaagcagctact
ggacaggtgagtgttcgtctgagagacagtgcagcccactcggtgaagagcattgaagat
ttgctggaagaattcaagtccaagactgccgaatttgtctga
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