Capsella rubella (pink shepherd's-purse): 17882096
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Entry
17882096 CDS
T02984
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03440
Homologous recombination
crb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
17882096
03460 Fanconi anemia pathway
17882096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17882096
03036 Chromosome and associated proteins [BR:
crb03036
]
17882096
03400 DNA repair and recombination proteins [BR:
crb03400
]
17882096
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
17882096
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
17882096
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
17882096
FA (Fanconi anemia) pathway
Downstream FA components
17882096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
17882096
NCBI-ProteinID:
XP_006286782
UniProt:
R0H4P4
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MSTWQLFSDSSGDGFRWEVAGRILQSDSESTPTKALESTAPLSSMADLLLQGGSKLIERE
ESMPAEIPMFRTGLGKSVSLKESSIARAKSILADDKVAFPDLQNTKSSNPQMRQVDTAGT
FPMFTTALGRSVPLKESSIAKALSMLGGDKLIDSANVLPRESGFGVPNSFFQTASNKKVN
VSSAGLARAKALLGLEEDDLNEFMHVSQSSSSHQQHGSSGLKTNEEFDALAAQHHSRTPG
KFGDHVSGKRSEILNPSLKASTKFQTADGKSLSVSAEALTRARNLLGDPELGTFFDNVEA
GDQFVTPQKDGKLGDIIINNGSANTVYTAHEEKTSNKHTSNSFVSPLRSSSKQFRSVKLE
NLALGGNLIKKFDAAVDETDCTLKITGLATHGLSDNRPSSSDMAVNNFKENGLNPRAKQF
GRPVDQPLADITNRSDIAYANNKQDSTQKKRLGKTVSASPFKRPRISSFKTPLKKNDLHA
SSGLSVVSSNTLNSKKVLSTRYPERSPRVYIKDYFGMHPTATTKMDYVPDHVRRIKSSNA
DKYVFPDESSSNMVGAETFLQLLAQSGASTQHASRKWVTNHYRWIVWKLACYEIYYPAKC
RGNFLTVTNVLEELKYRYEREVNHGHYSAIKRILSGDAPASSMMVLCISAINPNTNNDSQ
NTHGSDSCSNVKVELTDGWYSMNAALDVVLTKQLNAGKLFVGQKLRILGAGLSGWATPTS
PLEAVTSSTICLLLNINGTYRAHWADRLGFCKEVGVPLAFNCIKCNGGPVPKTLAGITRI
YPILYKERLGEKKSIVRSERTESRIIQLHHQRRSALVEGLVCEYQRGINGVHSQNDTDSE
EGAKVFNLLETAAEPELLMAEMSPEQLTSYTTYKAKYEAAKQMKMEKSVAKALEDAGLGE
RNVTPFMRIRLVGLTSLSYEGEHNPKEGIVTIWNPTERQRTELTEGKIYIMKGLVPMNSG
SETLYLHARGSSSRWQPLSPKASESFQPFFNPRKPMSLSNLGEIPLSSEFDIAAYVVYVG
DAYTDVQQKKQWVFVTDGSTEHSGEISHKLLAISFSNPMDDISVPHISHNLVGSVVGFCN
LIKRAKDAKNEMWVGEATENSVYFINAEAAYSSHLKSSSAHIQTWAKRSSSNSVIHELRR
RVLFIIGACNSPSC
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagttattttccgattccagcggcgatggtttccggtgggaagtcgct
ggccggattcttcagtccgactctgagtctactccaaccaaggcgctcgaatccacagct
cccttatcttccatggctgatctattgcttcaaggaggctcgaagcttatagagcgggag
gaatccatgcctgcggaaatcccaatgttcaggactgggctggggaagtctgtatctcta
aaagagtcttcgattgctagagccaaatccattctagcagatgacaaggttgcctttcca
gatttgcagaacacaaaaagctcaaatccccaaatgagacaagtggatactgctggaact
tttccaatgttcacgacggccttaggcagatctgtcccactgaaagagtcttcaattgcc
aaagctttgtctatgctcggtggtgataaattgattgactcagccaatgttcttcccagg
gagagtgggtttggtgttcccaactcgttttttcagacagcttctaacaagaaggtgaat
gtatcttctgcgggtctggcaagagccaaggcattgttaggactagaagaagatgacttg
aatgaatttatgcacgtgagccagtcgtcttcttcacaccagcaacatgggtcatctggg
ttgaaaacaaatgaggagtttgatgctctagcggctcagcatcattcaagaactccagga
aaatttggggatcatgtatcagggaagagatctgaaatcctaaatccatctttaaaggct
tcaacaaagtttcagacggctgatggaaaatcattgtcagtgtcagctgaggcattgaca
cgtgccagaaatcttcttggagaccctgagttagggactttctttgataatgtagaggca
ggtgaccagtttgtgacaccacagaaagatggaaagttaggtgatattattataaacaat
ggaagcgccaatacagtttatactgctcatgaagaaaagacaagcaacaaacatacgtca
aacagttttgtatctcctctgcggtcatcttcaaagcagtttagatcagtcaaattggag
aacttagctttagggggtaatttgatcaagaaatttgatgcggctgttgatgagacagac
tgtactctgaagatcacaggactcgctacacatggattgtcagataacaggccttcatca
tcagatatggcagtgaataatttcaaggaaaatggtttgaatccaagagctaagcagttt
ggaaggccagttgaccagccacttgccgatataacaaatcgcagtgatatagcttatgca
aacaataaacaagacagtactcaaaagaaaaggctgggaaagacagtctccgcttctcct
tttaaaaggcctcgaatttcctcctttaaaactcctttaaagaaaaatgatctgcatgct
tcaagtggtttatctgtcgtatcttctaatacacttaattccaaaaaggtgctttcgaca
agatatccagaaaggtctccaagagtatatatcaaggattattttggaatgcatccaaca
gctacgaccaagatggattatgtgccagaccatgtcagaagaatcaaatcaagtaatgca
gataaatatgtattccctgatgagtcttcctcgaacatggttggagctgaaacgtttctt
caattgttggctcagtctggtgcttccacacaacatgcatcgagaaagtgggtcactaat
cactacaggtggatagtctggaagcttgcatgctacgagatatactatccagccaaatgc
agaggaaattttctgacagtcaccaatgtacttgaggaactaaaatacagatatgagaga
gaggtcaatcatggtcattactctgcaatcaagagaattctaagtggtgatgctccagct
tcatcaatgatggtgctctgcatatcagctattaatccaaataccaacaatgattctcag
aacacacatggttctgatagttgcagcaatgtgaaagtagaactcactgatgggtggtac
tcgatgaatgctgctctggatgtagtgctaacaaagcagctgaatgctggaaaattgttt
gttgggcagaagcttcgaatcctcggggcaggactttctggctgggctacgccaacctca
cctcttgaggcggtaacttcaagtacaatctgtttgttgttgaatattaatgggacatac
agagctcactgggcagaccgactaggattctgtaaagaagttggtgtccccctggctttc
aactgtatcaagtgcaatgggggtccagtgcctaaaacgctagctggaatcacacgaata
taccccatattatacaaggaaagattaggtgaaaagaagtcaatagttcgatcagagaga
acggaaagtagaattatccagctgcatcatcagaggcgctcagctcttgttgagggtctt
gtgtgtgagtatcagagaggaattaatggtgttcacagccagaacgacactgacagcgaa
gaaggagccaaggtctttaacttgttagagacagctgctgaacctgaactcctaatggca
gaaatgagcccagaacagttgacatcttacacaacatataaagcaaaatacgaggcagcc
aagcaaatgaaaatggaaaaatcagtggcaaaagctctggaagacgcaggcttaggtgaa
aggaacgtcaccccattcatgaggattagacttgttggactgactagcttaagttatgaa
ggagagcacaatcctaaagaaggtatagtaacaatctggaatcccacggagagacagaga
accgagctgacagagggaaaaatatacataatgaaagggctagtaccaatgaactcaggt
tcagaaacactttacttgcatgccagagggtctagctcaagatggcagcctttgtctcca
aaagcttctgaaagttttcagccctttttcaaccctcgtaaaccaatgtctttgtcaaat
cttggtgaaattcctctttcaagtgaatttgatatcgctgcgtacgttgtatatgttgga
gatgcatacacagatgttcaacaaaagaagcagtgggtgtttgtgacagatggatccacc
gaacattcaggggaaatctcacacaaacttcttgctataagcttcagcaacccaatggat
gatatctctgttccccacatcagccataatttggttggatccgtggttggattctgcaat
ctaataaaaagagcaaaagatgcgaaaaacgaaatgtgggtaggtgaggcaacagagaac
tcggtctacttcataaacgcagaagctgcttactcttctcacctaaaaagtagcagtgcc
catatccaaacatgggctaagcgctcttcttccaactctgtcatccatgaacttcggcga
agagtcctatttataatcggtgcttgtaattcaccatcatgctga
DBGET
integrated database retrieval system
