Capsella rubella (pink shepherd's-purse): 17882285
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Entry
17882285 CDS
T02984
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 8
KO
K11593
eukaryotic translation initiation factor 2C
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17882285
03036 Chromosome and associated proteins [BR:
crb03036
]
17882285
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
17882285
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
17882285
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
17882285
microRNA pathway
RISC loading complex
17882285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
17882285
NCBI-ProteinID:
XP_023637185
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MDTSLRLPQPLERGSAKSKSSLLPLSRRGHGSNGRKINLLTNHFSVDFSIRELNSQYFFH
YSVAITYENGSPVMTKGVGRRILEKVQQTYQTDLDFKHFAYDGDKSLFTVGPLPRSKLDF
SVVLEDVPSRRNAEKRLKLPHQSEKYNVAISFAAKIPMQAISHTLQGRERNRIQDMIRAM
DVILGQNAARQGCLLFRQSFFYNDAKYFANVGEGVVCCKGFHSSFQNTQGGLSLKIDVST
TMIIKPGAVVDFLIENQGVKDPFSIDWKKAKSALKNLRVKVIHSNREYKITGLSELRCKD
QPFTLKKKNANGEAEEVETTVFDYFTKMRDIKLHYSGDLPCINVGKPNRPPVYFPIELCE
LVSLQRYTKALTSFQRSNLVKEARQKPQQNMDVLTKACKNSNYNDDPMLQDCAVRIGSGL
TQLHGRVLPTPKLKAGNGADIFPSNGSWNFIDKKFFEPATVTRWAVVNFSARCDPHKIIR
ELIRCGKMKGINVDPPYRVVFEENARFKGEPGSVRVDKMFEYLQSTLGQSPPKFLLCILE
KKNSDVYEKSCSVWNRESCIVPPQNVKEQYLINVLLKINAKLGGLNSILDMEQTRAMPLV
MRVPTIIIGMSISHGSPGQSDAPSIAAVVSSREWPFISKYKACVRTQTRKAEIIENLFKP
VSDKDDEGIMRELLLDFESSSGVKPNHIIIFRDGVSESQFNRVLNIELDQMMQKNHHTKF
FQTRSPDNVPPGTIVDSNICHPRNNDFYLCAHAGKFGTTRPTHYHVLYDEIGFNTDNLQE
LVHSLSYVYQRSTSAISLAAPICYAHLAASQMATAMKFEDMSETSPSHDGITTAGVVSVP
PMPKLNTKVSGSMFFC
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggatacgagtttacggcttcctcaacccttggaacggggatcagcgaagagcaagagt
agtcttcttccattatctcggcgtggccacggttccaacggccggaagattaatctgctc
actaatcactttagtgtcgacttcagtattagagaactaaactctcaatatttcttccat
tacagtgttgctatcacatatgagaatggtagtccagttatgaccaagggtgttggcaga
aggattcttgaaaaagttcaacagacttatcaaactgatttggatttcaaacactttgct
tatgatggcgacaagagtcttttcactgttggccctcttcccagatcaaaactagacttc
tctgttgttcttgaagacgtgccttctaggagaaatgccgagaaaagactaaagcttccc
caccaatccgagaaatacaatgttgcaatcagctttgctgcaaaaatcccaatgcaagcc
atttcacatactcttcaaggaagggaaagaaatcgtattcaagatatgattagagcgatg
gatgtcattttgggccaaaacgcagctagacaaggttgccttctatttcgccaatctttc
ttctacaacgacgcaaagtactttgcgaatgttggtgaaggtgttgtttgttgcaaagga
ttccattcaagcttccaaaatactcagggaggcttgtccctcaagattgatgtttcgact
acgatgatcataaaaccaggtgctgttgttgatttccttattgaaaatcaaggtgtgaaa
gatccattctctattgactggaaaaaggctaaaagtgctctcaagaatctaagagttaaa
gtcatccactcaaatcgagaatacaagataaccggactaagtgaactacgctgcaaagat
caaccctttactctgaagaaaaagaacgcaaacggggaagctgaggaggttgaaacgaca
gtgtttgattacttcactaaaatgcgtgatataaaactgcattattcaggtgacttacct
tgtatcaatgtcggtaaaccaaatcgtcctcctgtttactttcccattgagctctgtgag
cttgtatctctacaacgctatacgaaagctcttaccagtttccagaggagtaacctagtg
aaagaagcaaggcaaaagccacaacagaacatggatgtattaaccaaagcttgcaaaaac
agtaactataatgatgaccccatgttgcaagattgtgctgttagaattggctctggcctc
actcaactccatggtcgcgtgttaccaacaccaaagctaaaagctggcaatggagcagac
atatttcctagtaacgggagttggaacttcattgacaagaaattttttgagccagctaca
gtgactagatgggctgttgtgaacttctctgctcgctgtgacccgcacaagattattcgt
gagttgatcagatgtggaaagatgaaaggaattaacgtagatcctccataccgtgtcgtg
tttgaagaaaatgctcggtttaagggtgaacctggttctgtaagagttgataagatgttt
gaatatttacaatcaacactcggccaaagtcctccaaagttccttctatgcatactcgaa
aagaaaaactctgatgtttatgaaaaatcttgttcagtttggaatcgtgaatcatgtatt
gttcctcctcaaaacgtaaaggagcagtatctcataaatgttctcctcaagataaatgcc
aagcttggtggattgaactcaatcttggatatggagcagacacgagcaatgcctttggta
atgagagttcctaccatcattattgggatgtctatatctcatggctctccgggacagtct
gatgcaccatcaattgctgcggttgtgagctccagagaatggccatttatctcaaaatac
aaggcttgtgtgcgtacacagacccgtaaagctgaaatcattgaaaacctctttaaaccc
gtctctgacaaagatgatgaaggtatcatgagggagctcttgcttgactttgagtcaagt
tctggagtgaaaccaaatcacattatcattttcagggatggtgtgagtgagtctcagttt
aaccgagttcttaatattgaactggatcagatgatgcaaaaaaaccaccataccaagttc
ttccagaccagaagccctgataatgttcctccaggaacaatagttgatagcaacatctgt
cacccacgcaacaacgacttctatctttgtgctcatgctggaaagtttggaactacaagg
ccaacacattaccatgtgctctacgacgaaattggattcaatacagataacctccaagaa
cttgtgcattctctatcctatgtctaccagcgaagcacatctgccatctctcttgctgcg
cctatatgctatgctcatttggcagcttcacagatggcaactgcaatgaagtttgaggac
atgtctgagacttcaccgagccatgatgggatcacaacagctggagtagtctctgtgcca
cccatgccgaagctgaacaccaaggtttctggttcaatgttcttctgttga
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