Capsella rubella (pink shepherd's-purse): 17882681
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Entry
17882681 CDS
T02984
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17882681
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
17882681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
TPR_GEMI5
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
17882681
NCBI-ProteinID:
XP_006286905
UniProt:
R0H870
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MKNLKLFSEVSQNIQLQSSEEVVRFAAYDIDQSRLFFASSANFVYTLQLSSFQNGRAGAK
NALSVEVCSLDTEPGDFITAFDYLAEKESLLIGTSHGLLLVHNVESDVTELVGNIEGGVK
CISPSPTGDLLGLITGLGQLLVMTYDWVLMYERALGEVPEGGYVREADDLSVNCAGISIS
WRGDGKYFATMGEVLESGSMSKKIKIWDSDSGALQSSSETKDFMQGILEWMPSGAKIAAV
YKRKSDDGGLSIAFFERNGLERSSFRIGEPGDATVSCETLKWNSASDLLAGVVSCKTYDA
IRVWFFSNNHWYLKQEIRYPREAGVTFMWDPTKPLQLICWTLSGQVTVRNFMWLTAVMED
STAFVIDNSKILVTPLSLSLMPPPMHLFSLSFSSAVRDIAYYSRNSKNCLAVFLSDGNLS
FVEFPAPNTWEDLEGKVVNVEISDCKTALGSFVHLLWLDGHSLLCVSAYGSSHNTCLSSA
AYETDLHGSYLQEVEVVCYEDHVPDQVTYSGFKASVIFQTLLESPVMALAWNPSKRDSAF
VEFEGGKVLGYASRSGILETRISDDSVCFSSTCPWVRVAQVDAGGVHKPLICGLDDMGRL
YINGKSLCNNCSSFSFYSELANEVVTHLIILTKQDFLFIVDTKDVLQGDLSLGNVYFVID
GRRRDEENMSYVNIWERGAKVIGVLNGDEAAVVLQTMRGNLECIYPRKLVLSSITNALAQ
QRFRDALNLVRRHRIDFNVIVDLYGWQAFLQSAAEFVEQVNNLNHVTEFVCAMKNEDVTE
TLYNNFSFSKKGDKVFQLKDRCSNKVSSVLQAIRKALEEHIPESPSRELCILTTLARSDP
PAIEESLMRIKSVREMELLNSSDDIRKKSCPSAEEALKHLLWLLDSEAVFEAALGLYDLN
LAAIVALNSQRDPKEFLPYLQELEKMPESLMHFNINIKLKRFDSALRNIVSVGDGYFPDC
MNLIKKNPQLFPLGLQLITDPEKKETVLEAWADHLIDEKRFEDAATMYLCCCKLEKASKA
YREFGDWSGVLRVGALMKLGKDEILKLAYELCEEVNALGKPAEAAKIALDYCRDISGGIS
LLINAREWEEALRVSFLHTADGSVVKSSALECASGLVSEFKESIEKVGKYLTRYLAVRQR
RLLLAAKLKSEERSVVDLDEDTASEASSNLSGMSAYTLGTRRGSAASVSSSTATSRARDL
RRQRKSGKIRAGSAGEEMALVDHLKGMRMTDGGMRELKSLLICLVTLGETESAQKLQQSA
ENFQVSQVSAVELAQDTMSSEIVDEEVYCFEHYAKKTRSTARESDTFSWMLKVFISP
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttgaagcttttctcggaggtttcgcagaacatccagttgcagtcatctgaa
gaagttgtacggttcgcagcctatgacatcgaccaaagtcgcttatttttcgcatcttct
gctaatttcgtttacacccttcaactctcttcctttcaaaatggaagagctggggcaaaa
aacgctttgtctgtggaggtttgcagtctcgatacggagcccggggatttcatcacggcc
ttcgattatctcgctgagaaggagtctctattaattgggacttctcatgggcttctgctg
gtgcataatgtggagagcgatgtgactgagctagtcggaaatattgaaggaggtgtcaag
tgtatctctcctagtccgactggagatctacttggattgattactggtcttgggcagttg
cttgtaatgacttatgattgggttttgatgtacgagagggcacttggagaggttcctgaa
ggtggttacgtacgtgaagcagatgatttgtctgtaaattgtgcgggtatttccatttcc
tggagaggtgatggaaaatattttgcgactatgggtgaggttttagaatccggttctatg
tctaagaagattaagatatgggacagtgattctggtgctttgcagtcttcttcagaaaca
aaagatttcatgcaggggattcttgaatggatgccaagtggggcaaaaatcgcagctgtt
tataagaggaagtctgatgatggcggtttatcaattgctttcttcgagaggaatggactt
gagaggagctcgtttagaatcggtgaaccaggggatgctacagtatcatgtgaaactctg
aaatggaattctgcatcagatcttcttgcaggggttgttagttgcaaaacatatgatgcc
attagggtgtggttctttagtaacaaccactggtacctgaaacaggagattaggtatcca
agggaagctggggtaacgttcatgtgggatccaacaaagccactgcagttaatatgttgg
actctgtcagggcaggtgaccgttcgcaactttatgtggctaacagcggtcatggaggac
tcaacagcctttgtcatagataactccaagatactggtgacaccattatctttgtccttg
atgccacctcctatgcatttgttcagccttagtttttcttctgcggtcagagatatagca
tattactcaaggaattctaagaattgtctggctgtgttcttatcagatggaaacctgtct
tttgttgagtttcctgcaccgaatacttgggaagatctcgaaggcaaagtcgtcaatgtg
gaaatttcagactgtaaaacagcactggggtcttttgtacatcttctatggttggatggc
cactcacttctgtgtgtctctgcttatggttctagccacaacacatgtctctcttcggca
gcttatgagacagatcttcatggttcgtatttacaagaagttgaagtagtctgttatgag
gatcatgttcctgatcaagtgacttactctggctttaaggctagcgttattttccagaca
cttctcgaatcaccggtcatggctcttgcctggaatcctagtaagcgtgattcagccttc
gtggagtttgagggtgggaaagtgcttggatatgcatcacgatcaggaattttggaaact
cgtattagtgatgatagtgtatgtttttcatcgacatgtccttgggtgagggtggcgcag
gttgatgctggtggggtacataaacccttgatatgcgggcttgatgatatgggtagactg
tatatcaacgggaagagcctatgtaataactgtagcagtttctcattttattcagagttg
gccaatgaagtggttacccatctgattattttgaccaaacaggattttctctttattgtc
gataccaaggatgtactgcagggcgatctgtctcttggaaacgtatactttgttattgat
ggtagaaggcgagatgaggaaaatatgagctatgttaatatttgggaaagaggtgcaaaa
gtaataggagtcctcaatggagatgaagctgctgtcgtattacaaactatgcgggggaat
ctcgaatgcatatatcccagaaagctggtcctctcttccattacgaatgcgttagctcag
caacggttcagagatgcattaaacttggttaggcgtcacagaatcgactttaatgttatc
gtggatctatatgggtggcaggcatttctacaatcagctgcagaatttgttgaacaagta
aacaatttgaaccatgttacagaatttgtttgtgccatgaagaatgaagatgttacagaa
acactgtacaacaatttttccttttccaaaaagggggacaaggtttttcaattgaaagat
cgttgcagtaacaaagtatcatcagttctacaggcaattaggaaggcccttgaagaacat
ataccagagagtccatcaagggaactctgtattttgaccactcttgcacgaagtgatcca
ccagctattgaagaatctcttatgaggataaaatctgttcgtgaaatggagttgctaaat
tcttctgatgatataaggaaaaagtcttgtccatctgcagaagaagccttgaaacatctt
ctgtggttattagattctgaggctgtctttgaagctgccttaggtctttatgatctgaac
cttgcagctattgtggcactcaattcccaacgtgatccaaaagaatttctaccttatctt
caagagctggaaaaaatgcctgaatccctgatgcatttcaacattaacattaagttgaaa
cggtttgatagtgctcttaggaacattgtatcagtaggggatggctactttcctgattgc
atgaacttaataaagaaaaaccctcaacttttccccctgggcctccagcttattactgat
cccgaaaagaaagaaactgttctagaggcctgggcagatcatctcattgatgaaaaacgt
tttgaagatgctgcgactatgtacctatgctgctgtaaattggaaaaggcttcaaaggca
tatcgtgaattcggtgattggagtggggtactcagagtgggggcactgatgaaattgggt
aaagatgagatcttgaaattggcatacgaactctgtgaagaggtcaacgctcttgggaaa
ccagcagaagcagcaaaaatagctcttgattattgcagagatataagtggtggaattagt
ttgcttatcaatgcgagggaatgggaagaggcgttaagggtttcatttttgcatacagca
gatggctcagtggtgaagagttctgctctggagtgtgctagtggtctagtaagtgaattc
aaagaatcaatagaaaaggtaggaaaatatttgactcgctatttagctgttcggcagaga
cgtttattgcttgcagcaaagctcaaatctgaggagcggtctgtagttgatcttgacgaa
gacacagcttcagaagcaagtagtaacctgagtggaatgagcgcctatactttggggaca
aggagagggtctgctgcttcagtcagctcaagcacggctactagcagggcaagagacttg
aggcgccagaggaagagtgggaaaatccgcgctggcagtgcgggtgaggagatggctctt
gttgatcatttgaagggtatgcgaatgaccgatggaggaatgcgagagctgaagtcgttg
ttgatatgtctggtaacacttggtgaaacggagtcagcacagaagttacaacagagtgca
gagaatttccaggtctcgcaagtatctgctgtagagctagcacaggatacaatgtccagc
gagattgtagatgaagaagtttattgctttgaacattacgctaagaagacaagatccaca
gcacgagagtctgatacctttagctggatgcttaaggtcttcattagcccatga
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integrated database retrieval system
