Capsella rubella (pink shepherd's-purse): 17882946
Help
Entry
17882946 CDS
T02984
Name
(RefSeq) GATA zinc finger domain-containing protein 14 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
17882946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17882946
03019 Messenger RNA biogenesis [BR:
crb03019
]
17882946
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
17882946
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
17882946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
17882946
NCBI-ProteinID:
XP_023636456
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MRPPFNSFQPQARPHRPQQQQQHNNGYSNHHQRNGYQNPMEANQFRMMNPHMMSNPMMGH
MNNPIPMSNMPINPQFFNNLSNMPQQQLQFAMPNHINQLLPNLLGNLQFAVANNNLMGHS
LPLGQPNFFQPSLEPTAFTSQPQLNSFNPRPYPPVPNPHQNHQLRPPGFSEPRPQGQSVG
NVDNTNGFGPKNDFRNKFSKHQKFKGPGQGFQRSQLHQADNGKRKSGFNKDHRGKGNYNK
MKSGLNGSDAVDMAKEKKRSFALIYTPKEIKQWRDARRKNYPTKLKKLKKNASDSILDEE
ATLRRQQLQEVLAKQAELGVEVAEVPSHYLSNTDEQVNGDRGNNSGKNQYQNGQKGRVQN
NRHNKRRHDRKDRSNKKTRSEVENSSKESSMMTREPTLLEKLLSADIKRDKSHLLQVFRF
MVINSFFKELPEQPLKLPLIMVEETGCEHAREDPLTDVLCDGLSDDDDDDVNGDDDSSDE
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctccgttcaattccttccagcctcaagctcgtcctcatcgaccgcaacagcaa
caacaacataacaatgggtactctaatcaccaccaacgtaatgggtatcagaacccaatg
gaagctaatcaatttaggatgatgaatccacatatgatgagtaatccaatgatgggtcac
atgaacaatccgattccaatgtctaatatgccaataaatcctcagttcttcaacaatcta
tccaatatgcctcaacaacagcttcagtttgctatgcccaaccatatcaaccagttactt
cccaacctcttggggaatcttcagtttgcagttgctaataataatcttatgggtcattca
ctccccttaggtcaacccaatttcttccagccttctctcgaacctactgctttcacttct
cagccacagcttaattcctttaacccccgtccttatcctccggttccaaatccccatcaa
aatcaccagttacggcctccaggtttctcagagcctagaccacaggggcagtccgtagga
aatgttgataacaccaatggtttcggtcccaagaatgattttcgaaataaattttcaaaa
catcaaaagttcaaaggccctggtcaaggattccagagatctcagttgcatcaagcagat
aatggaaagagaaagtctggattcaataaggatcacaggggaaaagggaactataataag
atgaaatctggcctcaatggatctgatgctgttgacatggctaaggagaagaaaagatca
tttgctttaatctatacaccaaaagaaattaagcaatggcgtgatgctcggcgtaagaat
tatccaacgaaactcaagaaattaaagaaaaatgcttcagacagcatccttgatgaggaa
gcaacattgcgtcgccagcaactccaggaagttttagcaaagcaggctgaattaggtgtt
gaagttgcagaggtgccttcacattatttatccaatacagatgaacaagttaatggagat
agaggaaacaacagtggaaaaaatcagtaccagaatgggcaaaagggaagagtccagaat
aatagacataataagcgaagacatgatagaaaagataggtctaataagaaaacaaggtct
gaagtcgaaaattcatccaaagaatcttccatgatgacgagagaacctacattgcttgag
aagctcctaagtgcagacataaagagagacaaaagccatttactacaggtcttccgcttc
atggtaatcaattcattcttcaaggagttaccagaacaacctctgaagttgcctttgatt
atggttgaagaaactggctgtgaacatgccagggaagatcctttgactgatgttttatgc
gatggccttagtgatgatgacgatgacgatgtgaatggtgatgatgactcaagtgatgaa
gattga
DBGET
integrated database retrieval system
