Capsella rubella (pink shepherd's-purse): 17882955
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Entry
17882955 CDS
T02984
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crb01009
]
17882955
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17882955
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crb04040
]
17882955
Protein phosphatases and associated proteins [BR:
crb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
17882955
Membrane trafficking [BR:
crb04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
17882955
Ion channels [BR:
crb04040
]
Chloride channels
Chloride channel (CLC)
17882955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
17882955
NCBI-ProteinID:
XP_006290072
UniProt:
R0HD62
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MLSNHLQNGNESDSLIWSRVPDSDDTSADGVALLNSSRRDGGVNSLDYEVIENYAYREEQ
AHRGKLYVCYYVAVKWFFSLLIGIGTGLAAVFINLSVENFAGWKFALTFAIIQKSYFAGF
IVYLLINLVLVFSSAYIITQFAPAAAGSGIPEIKGYLNGIDIPGTLLFRTLIGKIFGSIG
SVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWPQLFKSDRDRRDLVTCGCAAG
VAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGVCGHFGGG
GFIIWDVSDGQDDYYFKELLPMAVIGVIGGLLGALFNQLTLYMTSWRRNSLHKKGNRVKI
IEACIISCITSAISFGLPLLRKCSPCPEAVPESGIECPRPPGMYGNYVNFYCKTDNEYND
LATIFFNTQDDAIRNLFSAKTMREFSAQSLLTFLAMFYTLAVVTFGTAVPAGQFVPGIMI
GSTYGRLVGMFVVRFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLP
LIMLVLLISKAVGDAFNEGLYEVQARLKGIPLLESRPKNHMRQMIAKEACQSQKVISLPR
VIRVADVASILGSNKHNGFPVIDHTRSGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCDP
SARNIRHSFSEFAKPVSSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLTKVY
NLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEENGESSAVELQQSTSVRGRYSETTTTTT
RIDATRPLLDDLLG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgaatcatctccagaacgggaacgaatccgatagcttgatctggtctcgtgtc
cctgattccgatgatacctccgccgacggcgttgctctactcaactcctctcgccgtgac
ggtggtgtcaatagtctcgattacgaagtcatcgagaactacgcttacagagaagaacaa
gcccatcgtgggaagctttatgtttgttactacgttgctgtcaaatggttcttctctttg
ctcatcgggatcggaactggattagctgctgtgttcatcaatctctcagttgagaatttc
gctgggtggaaatttgcgctcacttttgcgatcattcagaagtcttatttcgcggggttt
atagtttatcttctcatcaatttagtcttagtgttttcttctgcgtatatcattactcaa
ttcgctcctgctgctgctggttctggcattcctgagattaagggttatctcaatggaatt
gatattcccggcaccttgctatttagaacgcttatcggaaagatatttggaagcattggt
tctgttgggggtggtttagccttggggaaagaaggtccccttgtacatacaggtgcttgc
attgcatcgttgcttggtcagggtggatcgacgaaatatcatttgaattctagatggcca
caactatttaagagtgacagagatcgtcgtgatcttgtcacttgtggatgtgcagctgga
gttgctgctgcttttagagctccagttggaggtgtgttatttgcattagaggaggtcacc
tcatggtggagaagtcaacttatgtggcgtgtctttttcacttctgctattgtggctgtt
gtggtgcgtactgccatgggatggtgcaagagtggagtatgtggacattttggtggaggt
ggcttcattatatgggatgtatcagatggtcaagatgactactacttcaaagagctactg
ccaatggctgtaattggagtaattggaggtctacttggggcgttatttaaccaacttaca
ctctatatgacatcttggcgtcggaattccttgcacaagaaaggaaatcgagtgaagata
attgaagcatgcatcatctcttgtataacttcagcaatctcatttgggctgcctctctta
agaaaatgcagtccatgccctgaagcagttccagaatctggtattgaatgcccacgacct
ccaggaatgtatgggaattacgtaaatttctactgcaagacggataacgaatacaatgat
ctcgctacaattttcttcaatacgcaggatgatgctataaggaatttgttcagtgcaaaa
acaatgcgagagttcagtgctcagagtctactaacatttttggctatgttttatacatta
gcagtggtgacctttggcactgctgttcccgctggccagtttgttcctggaataatgata
ggatcaacttatgggcgccttgtaggcatgtttgtggtcaggttttacaagaagctcaac
attgaggagggaacttatgctttgctgggagctgcttcatttcttggaggctcgatgcgg
atgactgtatctttatgtgttatcatggttgaaatcacaaacaacctgaaacttttgcct
cttataatgctggttcttctcatctctaaggccgtcggtgatgcattcaatgagggattg
tatgaagtgcaagcacgcctgaagggcattccattactggaatcgagacccaagaatcat
atgcgtcaaatgatagcaaaggaagcatgtcaaagtcagaaggttatctctttacctcga
gttatcagggttgcagatgttgcttcaattttaggaagcaataagcacaatggatttccg
gtaatcgatcacacgagaagtggtgaaacacttgtgattgggttagttcttcgaagtcac
ttgcttgtcctccttcaatctaaagtcgatttccaacatagtcctttgccttgtgatcca
agtgccagaaatatcaggcacagttttagcgagtttgctaaacctgtttcatccaaagga
ttatgcatagaagacatacatttaacttcagatgatctagagatgtacatagatcttgct
ccttttttgaatccgtctccatacgttgttcccgaagacatgtcgttaacgaaggtttac
aaccttttccggcaacttggattgagacatctattcgtcgttccccgtccttcccgtgtg
ataggattgatcaccagaaaggatttgctaatagaggaaaacggagaatcatcagcagtg
gaactccaacagtcaactagtgtaagaggtcggtacagtgagacaacaacaacaacaacg
cggatcgatgctactcgtccgctgctagacgatcttttaggctaa
DBGET
integrated database retrieval system
