Capsella rubella (pink shepherd's-purse): 17883008
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Entry
17883008 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC17883008 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17883008
Membrane trafficking [BR:
crb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
17883008
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
17883008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Synaptobrevin
WD40
Beta-prop_HPS5
WDR55
PEP5_VPS11_N
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
17883008
NCBI-ProteinID:
XP_023636697
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MFARKFLQKSSGAHNPPPPTAPPPRGCLVAEDLEPHIVTHCGIPSTASLLAFDPIQCLLA
VGTLDGRIKVIGGDNIEAILASPKQLPFKNLEFMQNQGFLVSISNENEIQVWDLDLRQPA
SSLQWESNITAFAILHGTGYMYVGDEYGMVSVLKYSADEGKLVQLPYYVPTDALAEAGGL
SSPIDYPVVGLLSQPCSRGTRLLIAFSNGLLFLWDASEDRVMLVRGNKNLPVEGNTVGDS
LDASHDELSDLELDGKEISSLCWASTDGSVLAVGYVDGDILFWDFSDGQKGKPSNHVVKL
QLSSAEKRLPVIVMHWCLDVSRKGSGGKLFIYGGDIIGSDEVLTMLGLDWSSGMGGLKCV
GRADLTLSGSFADMVLSPIASSRQSGMFLFLLTNPGQLQAYDDTSLASLMSQKENKISVP
PLPYPMAVPTMDPHMTVATFAALNVNDKTSLALSEIVLAAKARTPRTPSGESTQWPLTGG
VPSHLDDYKLERLYMAGYQDGSVRIWDATYPCLSLIYVLEPKANVFDITGVDASVTAFCF
CSKTSYLAVGNECGMVRLFKLVGHKSGGTVEIVTNTDKKAHHLHQEDGPQWLAAFAFLNS
PVCTLQFVQSTRRLAVGFKCGKVAMLNIGVLSVMFVTNSLSDSGSPIKSLYVKSSSAPTN
SKSDPTDHNSINSEDDLILCAMNKDGQTNLLDGNTGKILASCLRPQKNPTAICMHIIEDC
YEISETPSEKPGGKVSGKEKHENKSHIIIASENHSPNGEQNAITETKLVDQGFVNSLFLM
CSEDALHLYSLKSLPQGSLERNMEVNLPRPCCWMGILKKDGRECAVLLLYKTGHIEIRSF
PNLEVVGESSLPSLLRWNFKPNMEKTVCSDDFGHVVLVNGCEVAILSLLASANGFRVPES
LPLLHDKVLAAAADATFSHISAHKKNHDAPKFLSNIIKGFRSSSEQKVDHVQDFSHLGNI
FSNPPYLKPSDIGGDDEKIVELNIDDIEIDEPVVILPLTEKDKKEKKDKRTDKEKLFDGA
SSDAQPKTRTVDEIKSKYRKAGETSAIASQAKDKLLERGEKLERISQRTAELQDGAENFA
SMAHELAKQMEKRKWWNI
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccagaaaatttctgcagaaatcctccggcgctcacaatcctcctcctcctaca
gctcctccgcctcggggatgtttggtagcagaagacctggagccccatattgtcacccac
tgtgggattccttccacggcatctcttcttgcctttgaccctattcaatgtctcttggct
gtgggaacattagatggaaggataaaagtcattggtggtgataatatcgaggcgattctt
gcatctcctaagcagttacctttcaaaaacttggagttcatgcagaaccaaggctttctg
gtcagcatctcaaatgaaaacgagattcaggtttgggatttggatcttaggcaaccagca
tcaagcttacaatgggagtcaaacattactgcgtttgcaattcttcatggcactggatat
atgtatgttggcgatgagtacggtatggtgtctgttctaaaatacagtgctgacgaaggg
aaattagtgcagcttccttattatgtgccaactgatgctttagctgaagcaggggggctt
tcatctcctattgattatccggttgttggacttctttctcagccttgttcaaggggaact
agactgttgattgcattttcaaatggattgctttttctttgggatgcatcagaagatcgt
gtcatgttagtacgaggaaacaaaaatctacccgtggagggtaacacagtcggtgattct
ttggacgcctcacatgatgagctttctgatcttgaactcgacggaaaggagataagttct
ttgtgttgggcatcaaccgatggttcagttcttgctgttggctatgtggatggggacata
ttattttgggacttttctgatggacaaaaggggaagccatctaatcacgttgttaagtta
cagttgtcttcggctgagaaaagacttcctgtcattgttatgcattggtgtttggatgta
tcccgcaagggtagtggtggaaaactcttcatctatggtggtgatatcattggatctgac
gaagtacttacgatgttaggtcttgattggtcttctggtatgggaggtctgaaatgtgtt
gggcgtgctgacctgacccttagcggttcatttgctgatatggtcttgtctccaattgcc
agttcaaggcaaagtgggatgtttttatttctgttgacaaatccaggacaattgcaagca
tatgacgatacctccctggcttctctgatgtctcagaaagaaaataagatttccgttcct
ccgctgccatatcctatggctgtaccaacaatggatccacatatgacagtggcaacattt
gctgcattaaatgtgaatgataaaacgtcactagccctttctgagatagtcttagctgca
aaagctcgaactccacgtactccatccggggagagtacacagtggcctctgacaggtggt
gttccaagccaccttgatgattacaagcttgaaagactgtacatggcaggttatcaagat
gggtctgtgcgaatatgggatgcaacctatccatgcctgtctcttatttatgtactggag
ccgaaggcaaatgtttttgacataactggagtagatgcatcagtaacggcattttgcttc
tgctctaagacttcttatttggctgttggtaatgaatgtggtatggttcgcctattcaag
ctggtcggccacaaaagtgggggaactgtggaaattgttaccaacactgacaagaaagct
caccatttgcatcaagaagatggtcctcaatggttggctgcatttgcctttctgaattcc
ccagtatgcaccctgcaatttgtacagtctacaagaaggcttgccgtgggatttaaatgt
ggcaaggttgcaatgctcaacattggtgtgctatcagtaatgtttgttacaaatagctta
tctgactcaggttccccaatcaagtcactctatgtgaaatcctcttcagctccaaccaac
tcaaaaagtgatccaactgatcacaattccataaattctgaagatgatttaatcttgtgt
gcaatgaacaaggatgggcagaccaatcttttggatggcaatactgggaaaatactcgcc
tcatgcttgagacctcaaaagaacccaactgcaatttgcatgcacattatagaggattgc
tatgagatttctgaaacgcccagtgaaaaaccaggtggaaaagtttctgggaaggagaaa
catgagaacaaatctcatataatcattgccagtgagaatcattcaccaaatggtgaacag
aatgctatcacagaaacgaaacttgttgatcagggatttgtgaactcattatttctcatg
tgttctgaggatgctctgcacttgtattctttaaagtctttacctcagggaagtcttgag
agaaatatggaggtaaatcttccaaggccgtgttgctggatgggaatcctaaaaaaagat
ggaagggaatgtgcagtactcctgctttacaaaacagggcatattgaaataagatctttt
cctaatctggaagttgtgggagagagctctttgccctcacttcttaggtggaacttcaag
cctaacatggagaagacagtatgttcagatgatttcggccatgtcgtcttggtaaatggt
tgtgaagtcgccatcctttcgttgttggccagcgcaaacggctttagggtcccagaatct
ttacctttgcttcatgacaaagtccttgcagcagctgcggatgctacctttagccatatc
tctgctcataaaaaaaatcatgatgctcccaaattcctaagtaacattataaaaggcttc
agatcaagcagtgaacagaaggtggaccacgtacaagatttttcccacctggggaacatc
ttttctaatccaccatacttaaagccttctgatatcggtggcgacgacgaaaagattgtc
gagctaaacattgatgacatcgagatagatgaacctgtggtcatcttgcctttgacagag
aaagacaaaaaagaaaagaaagataagagaacagataaggaaaaactgttcgacggtgca
tccagtgatgcacaacccaaaacgagaactgtggatgaaattaagtccaaatacagaaaa
gcaggggaaacctctgcaatagcgtcacaagcaaaggacaaacttcttgagcgtggagaa
aaactcgagagaatcagccaacgcacagctgagcttcaagacggggctgagaactttgca
tccatggcacatgaacttgctaagcaaatggagaagcgaaaatggtggaacatatga
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integrated database retrieval system
