Capsella rubella (pink shepherd's-purse): 17883013
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Entry
17883013 CDS
T02984
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17883013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17883013
03036 Chromosome and associated proteins [BR:
crb03036
]
17883013
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
17883013
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
17883013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
SNaCT7
Motif
Other DBs
NCBI-GeneID:
17883013
NCBI-ProteinID:
XP_006286919
UniProt:
R0FCJ1
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MDATNNTTNTTASNVAQAILAVLDYNSTPDARKAAVAFLESIKSGDIRVLANISLLLVKK
ECSSEIRLHAFKMLQHLVRLRWEELSPSERRDFAKLSVELMSETASPCEEWSLKSQSAAL
VAEIVRREGPDLWQELFPSLASLSAQGPLQAEVVSMMLRWLPEDITVHNEDLEGDRRRLL
LRGLTQSLPEILPLLYNLLERHFGAAMSEASRQQVELAKQHAAAVIACLNAINAYAEWAP
VLDLSRYGIINGCGALLSSHDFRLHACEFFKIVCSRKRPSDAPGAEFDSAISSLFQSLMN
VSREFLYRSASNAGVIDDSDYEFAECICESLVSLGSTNLQCIAADVGVLALYLQQMLGFF
QHFKLGLHFEAMQFWLALMRDLLSKPKAAANLSGEGSAVGGVQSSSHAENEKKKILSLIN
DDISCAILDVSFQRMLKKEKVPPRIALSLGPLELWSDEFDGKGDFGHYRSRLLELIKIVA
SHKPLVSSTKIAERIITLIKDLLGSPVQLQDVAVLDSQQLAFDSIVATVFDGSNEFAGGS
SEVHFSLRGIFEGLLQQLLSLKWTEPELIKMHAHYLDAVGPFLKYFPDAVGSVINKLFEL
LTSLPYIVKDPATSTSRVARLQICTSFIRIAKAAEKSVLPHMKTIADTMAYMQREGTLLR
GEHNILGEAFLVMASAAGAQQQQEVLAWLLEPLSQQWVQSEWQNNYLSDPMGFVRLCSNK
PFMWSLFHTVTFFEKALKRSGHGKSNLNSTSVTSQDLHPMAHHLSWMLPPLLKLLRVIHS
LWSPSVYQTLPPEMRAAMTMPDVERYSLLGEANPKLSKVSSVYADGSFDGGKEGQSEVNE
ANVRNWLKGVRDSGYYVLGLSATIGDTFFKCLDANYVAVALMENLQSMEFRHIRQLIHAF
VVSIVKSCPADMWDSWLEVLLQPLLIRCQQATSSSWASLMREGRAQVPDSFGVQNGPDMK
LEVMEEKLLRELTREIATLLSTIASPGLNPGLPILEHSGHVGRVDMSTLKDLLAFKSNSL
VGFLLNHKNMALPALQFCLEVFTWTDGEATTKVCCFCGVIVLLAILTNNVELREFVSKDL
FYAVIKSLAMESNAVNSADLVYLCREIFFYLADRDPAPRQVLLSLPCLTPNDLRAFEESM
AKTPSPKEQKQLMKSLLVLGTGNNLKALAAQKTVNVITNVTLRSRGPANTSEAKENEGET
IGLASVL
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggatgctaccaataacaccaccaacaccacggcgagtaatgtcgcccaagcgattctc
gccgttctcgattataactctactcccgatgctcgtaaagccgccgttgcattcctcgaa
tctattaaatctggagatatcagggttctagcaaatatttccctacttctagtgaaaaag
gagtgctcttcggaaattcgactgcatgccttcaaaatgttacagcatttggttagacta
cggtgggaggaattaagcccctcagagcgcagggattttgctaagctctctgtggaacta
atgtctgagactgctagtccatgtgaggagtggtctctgaagagtcagtcagctgccctt
gtagctgagatagttagaagagaaggccccgatctttggcaggagttgtttccctcacta
gcttccttgtctgcacagggacctttacaagctgaagtcgtctcaatgatgctgcgatgg
ctacctgaagatataacagttcacaatgaagacttggaaggtgacaggcgtcggttattg
ttgcgtggacttactcaatctctgcctgagattttgcctttattgtataatcttctcgag
agacactttggagctgccatgagtgaagctagtaggcaacaggttgaattggcaaaacag
catgcagctgcggttatagcttgtttaaatgccatcaatgcatatgccgaatgggctcct
gttctagatctttccagatatggaattatcaatgggtgtggtgctttactttcttctcat
gacttccgtcttcatgcttgtgagtttttcaaaattgtctgctcaagaaaaagacccagt
gatgctcctggtgctgaattcgattctgcaatcagcagtctgtttcagagtctgatgaat
gtctccagagaattcttatacagatcagcctcaaatgctggggttatagatgacagtgat
tatgagtttgctgagtgcatatgtgaaagtttggtttctttaggctcaacaaacttgcaa
tgtattgctgctgatgttggtgttctggctttataccttcaacagatgcttggtttcttt
caacactttaagttgggtcttcactttgaagcaatgcagttctggctggcattaatgagg
gatttactttcaaagccgaaggctgccgctaatctaagtggagagggatcagcagttggt
ggtgttcagagttcaagccatgctgagaacgaaaagaaaaagattcttagtcttataaat
gatgatatctcttgcgcaatcctggatgtatctttccagcggatgctcaagaaagaaaaa
gtccctcctcggattgctctttctcttggaccactggaactgtggagtgatgagttcgat
ggaaagggagactttggccattaccgatcaaggcttttagaattgatcaagattgttgct
tctcacaagccccttgtttctagtaccaaaatagccgaaaggattatcactctcattaaa
gatctgctgggttctccagttcaacttcaggatgtagcagtactggacagtcagcaattg
gcttttgattctattgtggcaacggtgtttgatgggtcaaatgagtttgctggtggtagt
tctgaagtccatttttcattgcgtggaatatttgaaggcttgcttcagcagcttctctct
ttgaaatggactgagccggaacttataaaaatgcatgcacactatctggatgcagttggt
ccctttctcaagtatttcccagatgcagttgggagtgttatcaacaaattatttgaactt
cttacctctcttccatacattgtcaaggatccagcaactagtacttcaagagttgcaaga
ttacagatttgtacgtcttttatacggatagccaaagccgctgaaaaaagtgttctgcct
cacatgaagactattgctgatacaatggcatatatgcaaagagaaggaactttgctccgc
ggggagcataacattttgggtgaagcatttcttgttatggcttcagcagcaggagctcaa
cagcagcaagaagttcttgcttggttactggagccattgagccaacagtgggtccaatca
gaatggcagaataattatctatcagatcctatggggtttgttcgtctttgctccaataaa
cccttcatgtggtctttgttccacactgttacattctttgagaaggctcttaagagaagt
ggacatggaaaaagcaacttgaattcaacctcggtaacaagtcaagatttgcatcctatg
gctcatcatctatcttggatgttgccacctctcttaaaacttctccgcgttatccattcc
ctttggtctccctcagtatatcaaactctacccccagagatgagggcagctatgacaatg
cctgatgtagagcgatatagtctccttggggaagcaaatcctaaattgtcaaaagtctct
tctgtttatgctgatggatcttttgatggtggtaaagaaggacaatcagaggtaaatgaa
gccaatgtgcgaaattggttgaaaggtgtccgagatagtggatactatgtgttgggtcta
tcggcaacaattggagatacattcttcaaatgcctagatgccaactatgtcgcagtggca
ctcatggagaacctgcagtcgatggagttcaggcacataagacagcttattcatgccttt
gtagtttctatagttaaatcttgtccggctgatatgtgggattcatggcttgaagtgctc
ctgcagccattgcttattcgttgtcagcaagctactagctcatcttgggccagtcttatg
cgtgagggcagagcacaagttccagattcgtttggtgtacaaaatgggcctgacatgaaa
cttgaagtaatggaagagaaacttctgagggaattaactagggagattgccacccttctt
tcaacaatagcttctcctgggttaaaccctgggcttccaattttggagcattcaggccat
gttggccgtgtggacatgtctactctcaaggatttgcttgcattcaaatccaactctctt
gtggggttccttttaaatcacaaaaacatggctctcccagcactgcagttctgtttggaa
gtatttacatggacagatggggaagcaaccaccaaagtctgttgcttttgtggtgttatt
gtccttctagcaattctaacaaacaatgtggaactcagagaatttgtgtcaaaagatttg
ttttatgcggtcattaaaagcttagccatggagtccaatgccgttaacagtgctgatcta
gtctatctatgccgtgaaatatttttttacctcgctgacagagacccagctccccgtcag
gtcttactttcactcccttgtctcactcccaacgacttgcgtgcttttgaagaatctatg
gcgaaaactccaagtcctaaagagcagaagcagctcatgaaaagcttgttggtgttaggt
acagggaataacttaaaagcgcttgctgctcagaaaaccgttaatgttatcacaaatgtc
actttgaggtcgcgtggaccagcaaacacatccgaagctaaagaaaacgaaggcgaaaca
attgggctggccagtgttttgtga
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integrated database retrieval system
