Capsella rubella (pink shepherd's-purse): 17883235
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Entry
17883235 CDS
T02984
Name
(RefSeq) DNA-directed RNA polymerase 2, chloroplastic/mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
crb03029
]
17883235
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
17883235
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
17883235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
17883235
NCBI-ProteinID:
XP_006289882
UniProt:
R0HCL7
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MSSTHTPVLLANHSKVFDHLIPLHKPLISSPNPVSQSFPMWRNIAKQAILRSAARLNVGS
HTLGISQESVFSKNLSFRCSVLGSISGSPCHEMGVRHLSGITRREEFFNNERGLNGTLAR
GFTSVAEEVLSTDVEEEPEVDELLKEMKKEKKRESHRSWRMKKQEHLGMGRTKFQNLWRR
QVKIETEEWERAAAEYRELLTDMCERKLAPNLPYVKSLFLGWFEPLRDAIAKEQEMYSLG
KSKATYAHYLDQLPADMIAVITMHKLMGHLMTGGENGCIKVVQAACTVGDAIEQEIRICT
FLDKTRKKKGDDNEESGEVENGTAMKEQDKLRKMVNELIKKQKLSAVRKILQSHDYTKPW
IADVRAKVGSRLIELLVRTAYIQSPANQQDNDMPDVRPAFVHTFKTVAKGSMKSGRKYGV
IECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLASYIMKTHGAKQQREAV
KSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADLVDRSDVPLPEKPDT
EDENILKKWRWEAKSAKKVNSERHSQRCDTELKLSVARKMKDEEGFYYPHNIDFRGRAYP
MPPHLNHLGSDLCRGVLEFAEGRPLGIPGLRWLKIHLANLYAGGVDKLSLEGRLAFTENH
LEDIFDSADRPLEGSRWWLQAEDPFQCLAVCINLTEALRSPSPETVLSHIPIHQDGSCNG
LQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRGPEAFPDALRARKL
LNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEIFGAACYAAKVTLAAI
DEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQ
RETDKVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLN
RILREKFVELYSQPILENLLESFEQSFPHLEFPPLPERGDLDLRVVLDSPYFFN
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtacccacacgccagtgttgttggcaaatcatagtaaggtatttgatcatttg
attccattgcataaacccttgatttcttctccaaatccagtttcccaatccttccctatg
tggagaaacattgctaaacaagcaattttgaggtcagctgctagattaaacgtcggttcc
catactcttgggatttctcaggagtctgtcttctcgaaaaatttgagctttcggtgttcg
gtgctcggttccatctcgggatcaccatgtcacgaaatgggtgttcgtcatttaagtggg
atcacgaggcgagaggaatttttcaacaacgagaggggccttaatgggacattggctaga
ggtttcacgagtgtagccgaagaggtcttatctacagatgttgaggaagagcctgaggta
gatgaattgttgaaggaaatgaagaaagagaagaagagagaaagtcatcgttcgtggcgg
atgaagaagcaagaacatcttggaatgggtcgtaccaagtttcagaatctatggagaaga
caagttaagatcgagacagaagaatgggaaagagctgctgcagagtacagggagcttttg
acggatatgtgtgaacgaaaacttgcgccgaatctgccttatgtgaaatccttgtttctg
ggttggttcgagccgttacgagatgcaattgctaaagaacaggaaatgtatagtctaggg
aagagcaaagcaacttatgcacattaccttgatcagttgcctgccgacatgatagctgtt
atcacaatgcacaagttgatggggcatttgatgactggtggtgagaacggttgtattaag
gttgttcaggctgcgtgtacagtaggcgatgccattgaacaagagataagaatatgcaca
ttcttggataagaccaggaagaaaaaaggggatgacaatgaggagagtggggaagttgaa
aatggaactgcaatgaaggaacaagataagttaagaaagatggtcaatgaattgataaag
aaacagaagttgtcagcagttagaaagatcttgcagtcgcatgactatacaaaaccatgg
atcgcagatgttagggctaaggttggaagtcgtttaatagagttattggtaagaacagca
tatatacagtctccagctaatcaacaggataatgatatgcctgatgtccgacctgcattt
gtgcatacctttaagacagtagcgaaaggaagcatgaaatctgggagaaaatatggtgta
atcgaatgtgaccctttggtccgcaaaggcttggaaaaaagtggaagatatgcagtgatg
ccatacatgccaatgctggttccccctctcaaatggtcgggatacgacaaaggtgcttac
ttgttcttagcgtcttatataatgaaaactcatggagctaagcaacaacgagaagcagtt
aagagcgcacctaaaggacaactacaaccagtctttgaggccctggatacacttggaagt
actaaatggagagtaaataagcgagtcttaacggttgtagataggatatggagcagtggc
ggatgtgttgctgatctagttgatcggagcgatgttcctttaccagaaaagcctgatact
gaagatgagaacattcttaagaaatggagatgggaagccaaatctgctaaaaaggtgaac
agcgagagacattctcagcgctgtgacacggaactcaagctttcggtagcacgaaaaatg
aaagatgaggaaggtttttattacccccacaatattgacttccgtggacgtgcatatccc
atgcccccacacttaaatcatctgggctctgatttgtgtcggggtgttttggagtttgct
gagggaaggcctctgggaatcccaggcttacgctggctgaagatacatttagcaaacttg
tatgctggtggtgtagataagttatcccttgagggacggctagctttcaccgaaaatcac
ttggaggacatatttgattctgcagacagaccacttgaaggaagcagatggtggctgcag
gctgaagatccatttcagtgcttggctgtatgcataaatctgactgaagctttgagaagc
ccatctccggagacagttctctcacatattcctatacatcaggatggctcctgcaatggt
ttacagcattatgctgctcttgggagagacacgttaggagcagaagctgttaatctagtg
gcaggtgagaagccggcagatgtttattcaggaatagctaccagggttcttgatattatg
cgccgagatgcagacagaggtcctgaagcttttccagatgcattgcgtgcaagaaaatta
ctcaaccaggtggatcgtaaacttgtaaagcagacggttatgacatcagtttacggtgtc
acctatattggcgctcgggatcaaataaaaagaagattgaaggaacgcagtgattttggt
gatgaaaaagaaatttttggggcagcttgctatgcagcaaaggtaacattagctgctata
gatgagatgtttcaagctgcacgtgccattatgcgttggtttggtgaatgcgcaaaaatt
attgcttcagaaaatgaaacagttcgatggacaacaccattgggtctgcctgttgtacaa
ccttaccaccaaatgggaacaaaactcgtaaagacatccctccagaccctatcgcttcag
cgtgagactgataaggtcattgtcaggcgacaaaggacagcttttcctccaaattttatt
cactcccttgacggatctcatatgatgatgactgcagttgcctgcaaaagagcaggcgtg
tgttttgcaggagttcatgactcgttttggacacatgcgtgtgacgtggataaattaaac
agaatactaagggaaaagtttgttgagctgtattcgcaaccgatactagagaatttgctg
gagagcttcgagcaatcgtttcctcatttagagtttcctcctctgcctgaacgaggagat
ttggatttaagagtggtgttagattcaccttatttcttcaactga
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