Capsella rubella (pink shepherd's-purse): 17883386
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Entry
17883386 CDS
T02984
Name
(RefSeq) RNA-binding protein BRN1 isoform X3
KO
K13207
CUG-BP- and ETR3-like factor
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17883386
Spliceosome [BR:
crb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
17883386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RBD_DGKtheta
RRM_3
Golgin_A5
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
17883386
NCBI-ProteinID:
XP_006287737
UniProt:
R0H701
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MAEGKEENREKNEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRG
CCFVLCPSRDEADKLVNACHNKKTLPGASSLLQVKYADGELERLEHKLFVGMLPKNVSEA
EVQSLFSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLV
VKWADTERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG
YMLPPIQNQAAFPNMITQPNQGNNNGLQGTSPDSVPPRLARRNFPMPPANYMGSGYPAVR
GHPYPMAYPRGIVNPRPLSSSPGSISPVIGNSGMSTPLGIGLSSVVQAEGPEGANLFIYN
IPREFGDQELAAAFQSFGMVLSAKVFVDKATGVSKCFGFVSYDSQPAAQNAINMMNGRHL
GGKKLKVQLKRDNNNGQQSSNPSLNS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagggaaggaggagaacagggagaaaaatgaagaagaagagagcgttaagctt
ttcgtcggacaaattccgaaacatatgtcggaatctcagctcttgacattgtttcaagag
ttcgctgtcgttgacgaggtcaacatcatcaaggataagatcacacgcgcctctcgagga
tgttgttttgtgctatgtccgtcgagagatgaagcagataagctggtcaatgcttgccat
aacaagaagacattgcctggggcgtccagtctattgcaagtaaagtatgcggatggcgaa
ttggaaaggctagagcataagcttttcgttggtatgcttccaaagaatgtgtctgaagct
gaagttcaatctttattctccaagtatggtaccatcaaggatctacagattttaagaggt
gctcaacagacaagcaaaggctgtgcttttcttaagtatgagacaaaagaacaagctgtt
tctgccatggaatccatcaacggaaaacataaaatggagggttcgactgttcctttagtt
gtcaaatgggcagacacagaacgagaaagacatacaagacgacttcaaaaggctcaatct
cacatcgctcgactagggaacggtgatccaacaaatccctcattgttcggagcattgccc
atgggttatgttccaccatataatggatatggttatcatcagcctcccggaacttatggt
tacatgctaccaccaattcagaaccaagctgcatttcccaatatgattacacaaccaaac
caaggcaataacaacggattgcaaggaacatctcctgactctgtgccacctcgtttggcc
cgtaggaactttcctatgcctcctgcgaactacatgggatctggttatcctgctgtacga
ggtcatccttatccaatggcttatcccagaggaattgtgaaccctcgccctctaagtagc
tctcctggatcaatatcacctgttattgggaacagtggcatgtcaacacctttaggcatt
ggtttgagttccgtggttcaagccgaaggtccggaaggtgcaaatctgtttatctataac
atacctcgggaatttggggatcaagaactcgcggctgcatttcaatcttttggtatggtt
ctgagcgccaaggtttttgtagacaaagccactggtgtaagcaaatgtttcggttttgtt
agttatgactcacaaccagccgctcagaacgctattaacatgatgaatggtcgccattta
ggcggtaagaaattgaaagtccagcttaagagagacaacaacaatggccaacagagtagt
aatccttccttgaactcctaa
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