Capsella rubella (pink shepherd's-purse): 17883457
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Entry
17883457 CDS
T02984
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
17883457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crb04040
]
17883457
Ion channels [BR:
crb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
17883457
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Ortholog
Paralog
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Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
17883457
NCBI-ProteinID:
XP_006287162
UniProt:
R0H5Q3
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MNKIRSLRCLLPETITSAASNRGSDNGNQVSLLLWRHQILDPDSNIVTYWNHVFLITSIL
ALFLDPLYFYVPYVGGPACLSVDISLAATVTFFRTVADIFHLLHILMKFRTAFVARSSRV
FGRGELVMDSREIAMRYLKTDFLIDVAAMLPLPQLVIWLVIPAATNGTANHANSTLALIV
LVQYIPRSFIIFPLNQRIIKTTGFIAKTAWAGAAYNLLLYILASHVLGAMWYLSSIGRQF
SCWSNVCKKDNALRVLDCLPSFLDCKSLEQPERQYWQNVTQVLSHCDATSSTTNFKFGMF
AEAFTTQVATTDFVSKYLYCLWWGLRNLSSYGQNITTSVYLGETLFCITICIFGLILFTL
LIGNMQSSLQSMSVRVEEWRVKRRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDEE
SILHSLPTDLRREIQRHLCLALVRRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREGD
PVNEMLFVIRGQIESSTTNGGRSGFFNSTTLRPGDFCGEELLTWALMPNSTLNLPSSTRS
VRALSEVEAFALSAEDLKFVAHQFKRLQSKKLQHAFRYYSHQWRAWGACFVQSAWRRYKR
RKLAKELSLHESSGYYYTDETGYNEEDEETGEYYYGSDGEDIEGVSMDNTNNNQNLGATI
LASKFAANTRRGTNQKASSSSTGKKDGSSNSLKMPQLFKPDEPDFSIDKEDD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatccggtctctccgctgcctcctcccggagaccataacctccgccgcctct
aatcgaggatctgacaacggtaaccaagtcagcctccttctatggcggcatcagatcctc
gaccccgacagcaacatcgttacctattggaaccacgtctttctcatcacttcgatcctc
gctctcttcctcgatcctctctatttctacgtcccttacgtcggtggtccggcgtgtctc
tccgtcgacatcagcctcgccgctacagtcaccttcttccgtactgtcgctgatatcttc
cacctactgcacatccttatgaagttcagaactgccttcgtcgccaggagctctcgggtt
tttggccgcggtgagcttgttatggattctagggagatcgctatgagatacttgaagaca
gattttctcattgatgtagctgccatgcttccccttcctcagcttgttatttggctagta
attccagcagccacaaacgggactgctaatcatgccaatagcactctcgcacttatcgtt
cttgttcaatacattccaagatcatttatcatattcccactcaaccaaaggatcataaaa
actactgggtttattgccaaaactgcttgggcaggagctgcatacaacctcctcctctac
attctcgctagccacgttttaggagcaatgtggtacctatcatcaatcgggcggcagttc
tcgtgctggtctaacgtttgcaagaaagataacgccctgagagttttagattgtcttcct
agcttcttggactgcaagagtctggagcaacctgagcgccagtattggcagaacgttact
caggttctttctcattgcgatgctacaagcagcactaccaattttaagttcggtatgttt
gctgaagcctttaccactcaagttgctacaacagatttcgtttccaagtacttgtattgt
ctttggtggggtttgagaaatctaagttcttatggccagaatataaccacaagtgtatat
cttggcgagaccctgttctgtattacaatttgtatctttgggttgattctcttcacactc
cttattggtaacatgcaatcttctttacaatcgatgtctgtaagagttgaggaatggaga
gttaagcgaagagacactgaagaatggatgagacatcgtcaactacctccagagcttcaa
gaacgtgtccgtagatttgttcaatataaatggcttgcaacccgaggtgtcgatgaagaa
tcaatcctccattctttacctacagacttacgccgtgaaatccaacgtcatctctgtctc
gctcttgtccgcagggtcccattcttctctcaaatggatgatcaacttcttgatgcaata
tgcggatgccttgtctcgtctttaagcacggcggggacctacatattccgtgaaggtgat
cctgtgaatgagatgctatttgtgatccgaggacaaatagagagctcaacaacaaatgga
ggaagatctggtttcttcaactccactactctaaggcctggagatttctgtggggaagag
cttcttacatgggctttaatgccaaactctacactaaatcttccgtcttcaactcgaagt
gtccgcgccctctctgaagtggaagcctttgccttaagtgcagaggatcttaagttcgtt
gctcatcagttcaagcgtcttcaaagcaaaaaactgcaacacgctttcaggtactattca
catcagtggagagcatggggagcatgtttcgtccaatccgcatggagaagatacaagcga
agaaagctcgcaaaagagctcagcctgcacgagagcagcggatactattacacagacgaa
acaggttacaatgaagaagatgaagaaactggcgaatattactatggaagcgacggtgag
gatatcgaaggcgtatcaatggacaacacaaacaataatcaaaatctaggagcaacaatc
ttggcatctaaatttgcggcaaacacaagaagaggcacaaatcaaaaggcttcaagtagt
agtactggtaagaaagatggatcttcaaacagtctaaagatgcctcaactattcaaacca
gatgagcctgatttctcaatagacaaagaagatgattaa
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