Capsella rubella (pink shepherd's-purse): 17883557
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Entry
17883557 CDS
T02984
Name
(RefSeq) small RNA degrading nuclease 2 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
17883557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17883557
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Pre-60S particles
RNases
17883557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
DUF2536
Motif
Other DBs
NCBI-GeneID:
17883557
NCBI-ProteinID:
XP_006287683
UniProt:
R0FF86
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MEDVLATADGKALVKLVKLGQKNAFKGEHGQWKEFLDFFDKQLGSSSLSDPSKRHRDDLV
AFLTTLKKKQDLQLLARVLKLDNDLFEKFRKRSPDETAEQRLVRMTLTHDEYPLDYLFPS
YAEDWVVTGLGKKKMESTKIEMIAIDCEMVLCGDGSEAVVRVAAVDRDLKVILDEFVKPH
QPVVDYRTFVTGLTSKDLEKATLSVVDIQEKLQMFLSEDTILVGQSLNNDLKVLKMDHAR
VIDTSLVFKYNYGGTRKPLRLKRPSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLA
ILDNGVETSVPLSKEMLEADKSRLYLHCIPCNVPYEELNGVVSRDIPHEVKPSKKQDRHF
YSAIVVFKSPEEANQAFENIAGDLGEDSTGLSQKQIFLEPSSSRLGSYIFVRKMVEEDSV
GEASAEEKNASSKKRKREYDSKEKTRERHRCKPFRRGKQRSYVKRR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgttctagccacggcagacggaaaggctctggttaagctggtgaagttaggg
cagaagaatgcttttaaaggcgaacacggacaatggaaggagttcctagatttcttcgac
aaacagctcggatcctcgagcttgagtgatccttcgaagcggcacagagatgacttggtc
gcttttcttaccacactcaagaagaaacaagatttgcagctcttggctagggttctgaaa
ctcgacaatgatcttttcgagaaattcagaaagagatctccggatgagactgctgagcag
aggcttgttcgaatgactcttacgcatgatgagtacccgttagactatttgttcccatct
tacgctgaggattgggttgtaacagggcttggaaagaagaagatggaatcgaccaagatc
gaaatgattgctattgattgtgagatggttctttgtggagatgggagtgaagctgttgtt
agagttgctgccgttgaccgtgatttaaaggtgattcttgacgaatttgtgaaaccgcat
caaccagttgttgactataggactttcgttactggacttacttctaaagatcttgaaaag
gctacactctcggtggtagatatacaggaaaagttgcagatgtttctttctgaggatact
attttggtaggtcaaagtttgaataatgatctaaaagtattgaagatggatcatgccaga
gtaatagatacttcacttgtgtttaagtataactatggtggtacaagaaagcctttaaga
cttaaaagaccttctttgaactatctgtgcaagtgtatattgggttatgaagtgcagaaa
gaaggtgttccccacaattgtgttcatgatgcagaagctgcgatgaaacttgtacttgct
atactagataatggagtagagacctctgttccactatctaaagagatgttggaagctgat
aaatcaaggctctaccttcattgcatcccttgtaatgttccatatgaagagttaaatggt
gttgtttccagggatatcccacacgaagttaagccgtcaaagaaacaagatcgtcacttc
tacagcgcgattgttgtttttaaaagtccagaagaagcaaaccaagcatttgaaaacatt
gcgggagacttgggagaggattcgacgggtttgtcacaaaaacaaatctttctagagccg
agttcatcaagacttggatcatacattttcgttcgtaaaatggttgaagaggattcggtt
ggggaagcctctgcagaggagaagaatgcaagttctaagaaacggaagagagaatatgat
tctaaagagaagaccagagagagacacagatgtaaaccattccgtagaggaaaacagaga
agctatgtgaaacgcagataa
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