Capsella rubella (pink shepherd's-purse): 17883686
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Entry
17883686 CDS
T02984
Name
(RefSeq) lisH domain and HEAT repeat-containing protein KIAA1468 homolog
KO
K26154
RAB11-binding protein RELCH
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17883686
Membrane trafficking [BR:
crb04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
17883686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
ADIP
KASH_CCD
CENP-F_leu_zip
ATG16
MOR2-PAG1_C
UPF0242
GAS
USP8_interact
Laminin_II
Prominin
ARMC9_LisH
Motif
Other DBs
NCBI-GeneID:
17883686
NCBI-ProteinID:
XP_023637068
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MDAERSSLCNFFVNFLMEENYLLTAFELLHELLDDGRDAQAIRLKEFFADPSRFPPDLIS
RYNSIRVADPQSLLEEKEALAEKLAISEYEFRLAQEDITRLKTEGQKKSDHSIDKSEELD
SDEYGNNRPEIQRKKKDFSFTDIGPLKTNERRDLNCAVKEYLLLAGYRLTAMTFYEEVTD
QNLDVWQDSPAHVPDALRYYYYQYLSSTSEAAEEKIAMLQENESLRKEIERLNKEKDGLH
KSNENFEEQISAFNKSTESLQKDLRDREKQVQSLKQSSEHQRRILNDCRAEITSLKMHIE
GSRAGQYMSANEGDLVKLQSKENVEEQISSLPKEVEKPIVEKDGGLISESSILADKGHIQ
TEDDLVVEEVKNIIADQSEVATEATNIIYADNSTLENQKEVSNYLLSPSNGSFSPSKLGN
ILIVDSGIGRGSNSKSDNANGEAASEEMGIGTIQILADALPKIVPYVLINHREELLPLMM
CAIERHPVSSTRDSLTHTLFNLIKRPDEQQRRIIMDACVSLSRNVGEMRTETELLPQCWE
QINHTYEERRLLVAQSCGDLAEYVRPEIRDSLILSIVQQLIEDSATVVREAAAHNLALLL
PLFPNTDKYFKVEEMMFQLICDPSGLVVETTLKELLPAVIKWGNRLDHILRVLLSHTLSS
AQHCPPLSGVEGSLESHLRVLGERERWNIDVLLRMLMELLPAIHQKAMETCPFSSIAKSE
ESAFSVSLLETYAEGRSEWPMFEWMHVDCFANLLQLACMLPQKEDHLRNRITKFLLAVSE
LFGSSYLTHIELPVFLVAVGNDEADLQFLPSAIHPRIKGLKPRTAVANRLATLCILPLLL
AGVLGAPSKREELTIFLRQLLVESKTKEKNQSSKHSSEVLDAVRFLCTFEEHHNMIFGIL
WEMVVDSTAELKINAAKLLKTIVPYIDAKVASANVLPALITLGSDQNLNVKYASIDAFGS
VAQHFKVDMIVDKILVQMDAFLEDGSHEAIIAVIRALLVAIPHTTERLRDYLLSKILQLS
ASPSSSTDVNRRRERANAFCEAIRALDATDLSQTSVREYLLPAIQNLLKDPDALDPAHKE
ALEITMKERSGGTFEAISKAMGAHLGIASSVTSLFGEGGLLGKKEATETTAIAPSSPTVQ
GPESPKVMAAATEDTRFRRIMRGNFTEMLRSKAKNQDET
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggagcgatcgtcgttgtgcaacttttttgtgaacttcctgatggaggagaac
tacctcttgacggcatttgagcttcttcacgaactcctcgatgatggccgcgatgcccaa
gcaattcgtcttaaggagttcttcgctgatccttcccgtttccctcctgatctgatttct
cggtataattcaattcgagttgcggatccacaaagtttgttggaggagaaagaagcgtta
gctgagaaactagctatcagcgaatatgaatttcgtctagctcaggaggatattacaaga
ttgaaaactgaaggacagaagaaatctgatcattctattgacaagtctgaagagttggac
tcagatgagtatggaaacaacagaccagagattcaacggaaaaagaaagatttttccttc
acagatatagggcctttgaagaccaatgaacgtcgagacctaaactgtgcagtgaaagaa
tatcttcttcttgcaggttacaggcttaccgctatgacattttatgaggaggtgacagac
cagaacttggacgtttggcaggacagtccagcacatgtgcctgatgccttgcgctattat
tactatcagtacctttcatcaacttcagaagcagctgaggagaaaatagccatgcttcag
gagaatgaatcgctgagaaaggagattgagaggctaaacaaagaaaaggatggactacat
aagagcaatgaaaatttcgaagagcaaatcagtgcttttaacaagtctacggaatcactt
cagaaggatcttagggatagagaaaagcaggtgcaaagtttgaagcaatcctcagagcat
caaaggaggatcctcaatgactgtagggctgagatcacttctcttaaaatgcatattgaa
gggtctcgtgctggtcaatacatgtcagcgaatgaaggtgatcttgtaaaattacaatcc
aaggaaaatgtcgaggaacagataagctctctgccaaaggaagttgagaaaccaatagtt
gaaaaggatggtggtttgatttctgaaagttctatactggctgacaaagggcacatacaa
acagaagacgatctggtggtggaagaagttaagaatataatagctgatcaaagcgaggtg
gcaacagaggcaactaatataatttatgccgacaatagtactttagagaaccagaaagaa
gtctcaaactatttgttaagtccatcaaacggtagtttttcacccagtaaacttggaaac
atcttgatagtggattctggtattggtcgtggctctaactcaaaatcagacaatgcaaat
ggtgaagctgcttctgaggaaatgggtataggaacgattcagatactcgcagatgctttg
ccaaagattgttccgtatgttctgataaaccatcgagaggaactccttcccctgatgatg
tgtgcaattgagcggcatccagttagcagtacaagagactccttgactcatacgctgttc
aacctgatcaaacgtccagatgaacagcagaggcgtattattatggatgcatgtgttagc
ctatcaaggaatgttggggaaatgagaacagaaacagaattgcttccacagtgctgggaa
cagataaatcatacatatgaagaacgcagactgctagttgctcaatcatgtggggacctt
gcagaatatgtccgccctgagatacgcgactctcttattttgtccatcgtacaacaactc
attgaagattctgccaccgtcgtacgagaagctgcagctcataatctggcattgctgctt
ccactttttccgaatacagacaaatatttcaaggtcgaggagatgatgtttcagctgata
tgtgatccatctggcctggtggttgaaaccacattgaaagaactacttcctgcggtgata
aaatggggtaacaggctggatcatattttgagagttcttctctctcacacattgagctct
gctcagcactgcccgcccctttctggagttgaagggtcattggagtctcatctacgagtc
ttaggtgaacgtgagcgatggaacattgatgtcctgctaagaatgctcatggagttgctt
ccagctattcaccagaaggcaatggaaacatgtcctttttcttctatcgcaaagtcagag
gaatctgcattctctgtttctttgcttgagacctatgccgagggacgttctgagtggcct
atgtttgaatggatgcatgttgattgctttgctaacttgttgcaactggcatgcatgttg
ccccagaaggaagaccatttgagaaatcggataacaaagtttctcttggctgtatctgaa
ctttttggaagttcctacctaactcacattgagttacctgtgtttttggtggctgttgga
aacgatgaggctgatcttcaattcttaccttctgcaatccatccaaggataaaaggcctg
aaaccaagaactgctgtagccaataggcttgccactctttgtattctaccacttcttttg
gcaggagttcttggtgcaccaagtaaacgcgaagagttaactatcttcttacgacaactc
ttagttgagagcaaaacaaaagaaaaaaaccagtcgtcgaagcacagtagcgaagttttg
gatgcagttcgcttcctttgcacttttgaggagcaccataacatgatatttgggattttg
tgggaaatggtcgtggattccactgcagaactcaaaatcaacgctgctaagctgttgaag
actatcgttccatatatcgacgccaaagtagcttctgccaatgtattaccagccttgatc
actcttggctcggaccagaacctgaatgtgaaatacgcaagcatagatgcatttggatct
gtagcacagcatttcaaagtggacatgattgttgataaaatcctagtccagatggatgct
tttctcgaagatggttctcatgaggctataattgcagtcattcgtgcactcttagttgct
attccgcacacaacagaacggcttcgagattatcttttgtccaagattttacaactctcg
gcaagtccaagctcttcaacagacgtaaatcgtcgccgagaaagagctaacgcgttctgt
gaagccatccgtgcacttgatgcaacagatctgtctcaaacaagtgtccgagaatacctc
cttccagcgatacaaaacctactgaaagatccagacgcgcttgatccagcccacaaggag
gcgttagagatcacaatgaaggagagatcaggtgggacatttgaagcaattagtaaagca
atgggtgcacatttggggattgcatcatctgtgacaagcttgtttggagaaggtggcttg
ttggggaaaaaagaagcaacggaaaccacagcgattgcaccgtcatcaccaacagttcag
ggaccggagtcaccaaaggttatggctgcagcgacagaagacaccagattcagacgtatc
atgagaggcaacttcacagagatgctaaggagtaaagccaagaaccaagatgagacatag
DBGET
integrated database retrieval system
