Capsella rubella (pink shepherd's-purse): 17883687
Help
Entry
17883687 CDS
T02984
Name
(RefSeq) flowering time control protein FY isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
17883687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17883687
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
17883687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
WDR55
EIF3I
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_DCAF12
PEP5_VPS11_N
WD40_like
PROPPIN
WD_LRWD1
B-prop_COPA_B_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
17883687
NCBI-ProteinID:
XP_006287212
UniProt:
R0H5U1
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MYGESMQQLPPIQNQHHIGPGQGPGHGGDLHRGSQMPPPPMMRQSSASSSNINPDYHHPS
APNNPFDPHDNFGAKRMRKHTQRRAVDYTSTVVKYIQARTWQRDSRDRTSLQPTPAAAVD
MLPTVAYSDNPSTSFAAKFVHTSLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSF
NFEMILQAHDQPIRSMVWSHNDNYMVSGDDGGTIKYWQNNMNNVKANKTAHKESIRDLSF
CKTDLKFCSCSDDTTVKVWDFAKCQEECSLTGHGWDVKCVDWHPTKSLLVSGGKDQIVKL
WDTRSERELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKD
VTSLAWHPFHEEYFVSGSSDGSICHWVVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSG
SNDHTTKFWCRNRPADNPRDVLPMQNQGYNEQGFGRQPDNFQPSEASPIPGAFVPGLTRN
EGTIPGIGIAMPFDASSQGEHKQPLPGSMAVGAPPLPPGPHPSLLGSGQQQGYQQQQHHQ
GHPQQMPPMPNMPHHQLPPSSHMPLHPHHLPRPMQMPPHGHMPPSSMPMSHQMPGSMGMQ
GGMNPQMSQSHFMGAPSGVFQGPPSSGGPQMYPQGRGGFNRPQMRPGYNNPFQQQPQPPL
PPGPPPNNNNQQHQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcgaatcgatgcaacagcttcctccgatacaaaatcaacaccatataggaccc
ggacaaggaccaggacacggcggcgatttgcacaggggttcacagatgcctcctccgccc
atgatgcggcagtcgtctgcttcttcctctaacattaatcccgactaccaccacccctct
gccccaaacaatcccttcgacccacatgacaattttggggcgaaacgaatgagaaagcat
acacagagaagggctgttgattacaccagcaccgttgtcaaatatattcaggctcggaca
tggcagcgagactcaagagataggacctctttgcaaccaaccccagctgcagcagttgat
atgcttcccactgttgcctattcagataatccttcaacaagttttgctgcaaagtttgtt
cacacatctctaaacaagaatcgttgttcaatcaaccgtgtattgtggacaccttcagga
agacgtcttatcactggctcccaaagtggggagtttactctttggaatgggcaatctttt
aattttgaaatgattcttcaggcacatgatcaacctataagatcaatggtatggagccac
aatgacaattatatggtttctggtgatgatggaggcacaataaagtattggcagaacaat
atgaacaatgtgaaagccaataaaactgctcacaaggaatcaattcgcgatttaagtttt
tgtaaaacagatttgaagttctgctcgtgttctgatgatacgactgttaaagtctgggat
tttgccaagtgccaagaagaatgctcattaaccggccatggttgggatgtcaagtgcgtt
gactggcacccgacgaagtccctactagtttctggtggaaaagaccaaattgtcaaactc
tgggatactagatctgagagagagctttgctcacttcatggtcacaaaaacatagtgctt
agtgtgaagtggaaccaaaatggcaattggcttttaacagcctcgaaagatcagataatt
aagctgtatgatataaggactatgaaggagcttcagtcctttcgtgggcacacgaaagat
gtaacatctttggcgtggcatccctttcatgaggaatattttgtcagtgggagctctgac
ggatccatttgtcattgggttgtggggcatgaaaatccgcagattgaaatcccaaatgct
catgataacagtgtttgggatcttgcatggcatcctattggatatctactttgcagtggt
agcaatgatcacacaaccaagttttggtgcagaaataggcctgcagataatcctcgagat
gtccttcctatgcagaaccaaggctataatgaacaaggttttggccgccagcctgataat
tttcaaccatctgaggcatcgccaatccctggagcatttgttcccgggctgacacggaat
gaggggaccatcccaggaatcggaatagcaatgccatttgatgcatcctctcaaggggaa
cataaacagcctcttccaggttcaatggcagtgggggctcctccgctgccacctggtccc
cacccatcgcttcttggaagtggccagcagcaagggtatcagcaacaacaacaccaccaa
ggccatccccagcaaatgcctccaatgcctaatatgcctcaccatcagctaccaccatca
tctcatatgccattgcaccctcatcatcttcccaggcctatgcaaatgcctcctcacggt
cacatgccaccttcctcaatgcctatgtctcatcagatgcctggatcaatgggaatgcaa
ggtggcatgaatcctcagatgtcgcaaagtcattttatgggtgctccttcaggagtattt
caaggaccaccaagcagtggtggaccccaaatgtatcctcaaggacgtggtggtttcaac
cgtccacaaatgagacctggctacaacaaccctttccaacagcagccacagccgccttta
cctccgggccctccaccgaacaacaacaatcagcaacatcagtag
DBGET
integrated database retrieval system
