Capsella rubella (pink shepherd's-purse): 17883777
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Entry
17883777 CDS
T02984
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
17883777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17883777
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
17883777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
17883777
NCBI-ProteinID:
XP_006290188
UniProt:
R0FM64
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MSNCLQLKPACIGCGSQSDLYGSACRHMTLCLKCGKTMAQNKAKCLDCGTVLTRLIREYN
VRAAAPTDKNYFIGRFVTGLPNFKKGSENKWSLRKDIPQGRQFTDAQREKLKNRPWILED
ETGQFQYQGQLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN
RRKTADGYQRWMMKAANNGPALFGEVDNEKEAGGSSGGGGRGRKKSSGGDEEEGNVSDRG
DEDEEEEASRKSRLGLNKKSNDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG
NDPEEREDLLAPEIPAPPEIKQDEDDEENEEEEGGLSKSGKELKKLLGKSNGLDESDEDD
DDDSDDEEEETNFAPITNSKQKEAAKEEPVDNAPAKPAPSGPSRGTPPAKTSKGKRKLNE
SDSKKPSSSVQKKVKTENDPKSSVKEERTKMVSKSNTPTKAVKAEPASAPASSSAATGPV
TEEEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFADILRKISKIQKNAGSQNFVVLR
EK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaactgtttgcaattgaaaccggcttgtataggatgcggatcacaatccgatttg
tatggaagcgcttgtagacacatgaccttgtgtttgaagtgtggtaaaaccatggcgcag
aataaagctaagtgtcttgattgtggaaccgtcctcacacgtttgattcgggaatacaat
gttcgtgctgcggcaccaacagataagaactacttcattggtaggtttgtgactggtctt
cctaatttcaagaaaggctctgagaataaatggtctcttcgtaaagatataccacaaggt
cgtcagtttactgatgcacaaagggagaagttaaagaacagaccttggatattggaggat
gaaactggtcagtttcagtaccaaggacaacttgaaggctctcaatctgcaacttactat
ctcttggtgatgcagaacaaggagtttgttgcgattcctgctggttcttggtataacttc
aacaaggttgcacagtataaacaacttacattggaagaagcagaagagaagatgaagaat
cgtagaaaaactgctgatgggtatcaaaggtggatgatgaaagctgcaaataatggtcca
gcgttatttggagaagtggataatgaaaaagaggccggtggaagcagtggaggtggtggc
aggggtcgtaaaaagtcatcaggcggtgatgaggaagaaggaaatgtctctgacagaggg
gacgaagatgaagaggaagaggcatcacggaaaagtagacttggacttaataagaagagt
aatgatgatgatgaagaaggtccaaggggtggtgatcttgacatggatgatgatgacatt
gagaagggggatgactgggagcatgaggaaatttttactgatgatgatgaagcagtcgga
aatgatcctgaggaacgtgaagaccttctggctcctgaaattcctgctcctccggaaata
aagcaggatgaagatgatgaagaaaatgaagaagaggagggaggattgagcaaatctggt
aaagagttaaagaaactgcttggtaaatctaatggtttggatgaatctgacgaagacgat
gatgatgattcagatgatgaggaggaggagacaaacttcgctccaattacgaattcaaaa
cagaaggaggcagcaaaagaagaaccagtcgataatgcacctgcaaaacctgccccatct
ggaccatctcgtggaacacctccagcaaaaacatctaagggaaagagaaaattaaacgaa
agcgactctaaaaagcctagcagctctgttcaaaagaaagtgaagactgaaaatgatccg
aaatcttcggtgaaggaagagagaacaaaaatggtttccaaatccaacacaccaacaaaa
gcagtgaaagctgaaccagcttctgctcctgcatcatcctcagctgcgaccgggcctgtg
actgaagaagaaatccgggctgtcctgatggagaagaagcaagtcactacacaggatctt
gtttccaggtttaaggcaagactcaagaccaaagaggacaagaatgcttttgccgatatt
ctgaggaagatctcaaagattcagaagaacgctggttctcaaaacttcgtcgttttgaga
gaaaaatga
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