Capsella rubella (pink shepherd's-purse): 17883912
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Entry
17883912 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC17883912
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17883912
Enzymes [BR:
crb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
17883912
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
17883912
Prokaryotic type
17883912
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
17883912
NCBI-ProteinID:
XP_006289729
UniProt:
R0FJL9
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MAKSLHLTRLMSSSARMAMTSPIFFSVKPMRNIHKPYLASLFLSTTSTPYPLQYDMIINR
PTQSSLSQTRRRPPKAIESGSPESAEPEFDSWVDNKLALEREKGRPGSGDPEMDKAKRKY
YSKRRKRLYGSDSEDESSRKSDEGFVELKPEVVEFDRLHQREEELYFFDTFAYPWEKDKH
YKMVYQLEKKYFPDQCLDKAFLQPGETLKKNDDSGKTRGKKKVGALAGKRNEAKRIGMEK
CDEDDDGDDKLVFFDEAKEKEEKKNSEEKVVTEKKVEQFFKSLTKSPSEKGVASGGGDGE
PFLVTRNGELPPRWDGPNGTVLLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATG
LLIVCIGKATKVVDRYQGMIKGYSGVFRLGEATSTLDADSPVIQREPWEHIKDDDIKKAL
TSFLGEIWQVPPMFSAIKVGGEKMYEKARRGETVELSPRRISIFQFEIERSLDDRQNLIF
RVICSKGTYIRSLCADLAKALGSCAHLTALRRDSIGEYSANDAWEFNELEAAITKNYF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatctctacacttgacaagattaatgtcgtcttctgcaagaatggctatgact
tctcccatctttttctcagtcaaaccgatgagaaacatccataaaccctacttggcatct
cttttcctgtccacaacatctacaccatacccacttcaatacgacatgatcattaatcgt
cccacacagtcttctctctcccaaacccgtcgtcgaccccctaaagccatcgagtccggc
tcgcctgagtcagcagagccagagttcgattcgtgggtcgacaataaactggctttagag
cgtgaaaagggtcgacccggttcaggagatccggaaatggacaaggcgaagaggaagtac
tatagtaagaggaggaagaggctatacgggtctgattctgaagacgagagcagccggaaa
tcagatgaaggattcgtggaattgaaacctgaagttgtggaatttgataggttacatcag
agagaagaggaattatatttctttgatacttttgcgtatccatgggagaaagataagcat
tataagatggtgtatcagttagagaagaagtattttcctgatcaatgtttagataaggcc
tttctgcaacctggagagactttgaagaagaatgatgattctgggaaaactagagggaag
aagaaagtgggagcacttgccgggaagagaaacgaggctaaacgaattggtatggagaaa
tgtgatgaggatgatgatggtgatgacaagttggtgttttttgatgaagccaaggagaag
gaggagaagaagaattcagaggaaaaggttgttactgagaagaaagtggaacagttcttt
aaaagtttgacgaaatcccccagtgagaaaggtgtggctagtggtggtggtgatggagaa
cctttccttgttaccagaaacggtgaacttcctcctagatgggatggtcctaacggtaca
gtgcttttggtgaacaaaccaaaaggatggacttccttcactgtctgtggtaagctacga
cgattagtcaaagtgaaaaaggtgggtcatgctggaacactcgatcccatggctactggt
ctattaattgtgtgcattggtaaagccactaaggttgttgacagatatcaaggtatgatc
aaaggttatagcggtgtttttcgtcttggtgaagccacttcaactttagacgctgactct
ccagtgattcaacgagaaccttgggagcatattaaagatgatgatataaagaaagcatta
acatcatttcttggagaaatatggcaagttccaccaatgttctctgcgataaaagttgga
ggtgagaagatgtacgagaaggcaagacgaggagaaacggtagagctttctccaagacga
atctcaattttccagtttgaaatcgaacgcagtttagatgacaggcaaaatcttattttt
cgagttatatgctctaagggtacctacattagatccctctgtgcagatcttgctaaagct
cttggaagttgtgctcaccttactgctcttcgccgggattccatcggcgaatattctgct
aacgatgcttgggagttcaatgagttagaagcagcaattaccaaaaactacttctag
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