Capsella rubella (pink shepherd's-purse): 17883978
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Entry
17883978 CDS
T02984
Name
(RefSeq) putative RING-H2 finger protein ATL36 isoform X1
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17883978
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
17883978
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
17883978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
Prok-RING_4
zf-RING_16
zf-RING_6
PA26
PglL_A
zf-RING_4
RINGv
Tmpp129
Motif
Other DBs
NCBI-GeneID:
17883978
NCBI-ProteinID:
XP_006288100
UniProt:
R0HBI1
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MNTFPRGLIHRMVSSIVLTLLLLFFLPNVTCQQELESVDRNRKSNFSAESIIAIVLLATF
MSLSMVACCFHKHNTFYSVEIETAGHEVLHNRARRGLEKEVIESFPSFLYSEVKGVKIGK
GGVECAICLSEFEDQERLRWLPPCSHTFHANCIDVWLASRSTCPVCRANMSLKSGENFTY
LNMDVEVGNVQRDVQELPDERSFTGSSVTPRSSSTGLLSSWRMPEIFFPRSHSTGHSLVQ
LCENLDRFTLQLPEELQRQLVSLNLVRRSHMNLPQAMSSRQGYRSGFISGRQRLQRAISM
SLSFSIQPASVLSTHDRSGKVQETSQDKDNNLGERSFERLMPEKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaataccttcccgagaggtctcatccatcgtatggtatcaagtattgtattgacactc
ttgcttttgttttttttgcctaacgttacctgccagcaagagttagaatccgtagaccgc
aatagaaaatcaaatttctccgcggaatcgataattgcaatagttttgcttgcaacgttt
atgtcattgagcatggtcgcttgttgctttcacaagcacaacacattctatagtgtagag
attgagacggcaggccatgaagtgttgcataatagagcgaggcgtggactcgaaaaagaa
gtcattgagtcctttccatctttcctctattcagaagttaaaggggtcaagataggcaaa
ggcggagtagaatgtgcgatttgtctaagtgagtttgaggatcaagaaagactacgttgg
ttgcctccttgtagccacacttttcatgctaattgcatcgatgtgtggctcgcttctcgg
tccacatgtcccgtctgccgtgcaaatatgtctctaaaatctggtgagaactttacatat
ctgaacatggatgttgaagtgggaaatgtacaaagagatgttcaagaactccctgatgag
agaagtttcacaggtagtagtgtgacacctagatcgagttctacggggttattatcgagc
tggcgtatgcctgagatattcttccctcgatctcattcgaccggacattcattggttcaa
ctatgtgagaatctagaccgattcacacttcaactaccagaagagctgcaaagacaattg
gttagcttgaatctggtaaggagaagccacatgaacttacctcaagccatgagttcgaga
cagggctacaggagcggtttcatttcgggaaggcaaaggctccaacgggccatatctatg
tctctctctttctctattcaacctgcttctgttctgtctacacatgacaggagtggcaaa
gttcaagagacttctcaagataaggacaacaacttaggtgaaaggtcattcgaacgcctc
atgccagagaaggtgtaa
DBGET
integrated database retrieval system
