Capsella rubella (pink shepherd's-purse): 17883984
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Entry
17883984 CDS
T02984
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17883984
Enzymes [BR:
crb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
17883984
Transfer RNA biogenesis [BR:
crb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
17883984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
17883984
NCBI-ProteinID:
XP_006289068
UniProt:
R0FIU8
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MMSVRAINGCSIFRTASSGGGPPVSLLRHRIQRLRATHLREFSKLGLDFPLLRINRRFLG
NNGGSDATSCSSCIHSLVESVSEELQSINRRKGSRTRVRASVKVKLTSYGEVLEDKLVNQ
ELEAGLLLEFKKDADRVLLAVSHRRDGKKNWMVFDQNGVTCSIKPQQITYIVPGVYNFDH
TGVTDFLQRAQENLDPQLLEFAWIELLEKNKPVTPEELAEMIYGRSDSLESYCAHFLLSQ
DEIYFSVLESKGSRSIYSPRPTEQVEELLRRQRMKEAEEKEFQEFIQLLKSAKKAPSHAK
PLKSSWLADDKVQDNIRALEAYAIDAWASTDQRKIAGTILKSMGLQKTSVSALNLLIDIG
YFPVHVNLDLLKLNLPTHHSEAITEAAEVLLSESSDIDAVRRIDLTHLKVYAIDVDEADE
LDDALSATRLQDGRIKIWIHVADPARYVTPGSKVDREARRRGTSVFLPTATYPMFPEKLA
MEGMSLRQGENCNAVSVSVVLRPDGCIAEYSVENSIIRPTYMLTYESASELLHLNLEEEA
ELRLLSEAAFIRSQWRSEQGAVDTTTLETRIKVVNPEDPEPLINLYVENQAERAMRLVFE
MMILCGEVIATFGSQHNIPLPYRGQPQSNIDVSAFAHLPEGPVRSSSIVKVMRAAEMNFR
CPVRHGVLGIPGYVQFTSPIRRYMDLTAHYQIKAFLRGGDNFPFSAGELEGIAASVNMQS
KVVRKLSNSSLRYWVIEFLRRQQKGKKYTALILRFVKDRIASLLLVEVGFQATAWVSEGK
QVGDEIQVKVEEAHPRDDLILFKEVI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggtgagggcaatcaatggttgctccatctttcgcaccgcctcttccggcggt
ggtcctcccgtctccttacttcgccaccgtattcagcgcctcagagcaactcatctccgt
gaattctcaaaattagggttagattttccattacttcgcattaataggcgatttctcggg
aataatggaggtagtgatgctacgagctgttcatcttgcattcatagtctagtcgaaagt
gtttccgaagagctccagtccataaacaggcgtaagggaagccgtaccagagttcgtgcc
agtgttaaggttaaattaacaagctatggagaggttctggaggataagctagtaaaccag
gaactagaggccggtttgcttctggagtttaagaaggacgcagacagagtattgttggca
gtttctcatagacgtgatggcaagaagaactggatggtctttgatcagaatggtgttact
tgttccatcaaaccgcagcaaattacgtacatcgttccgggtgtttataattttgaccat
acaggagttactgattttctccagagggctcaggaaaatttggatccccaactgcttgag
tttgcttggatcgagttacttgagaagaacaaacctgtaacgccagaagagttagcagag
atgatatatggtcgctcagattctcttgaaagctattgtgctcattttttgttatcacaa
gacgagatatacttttctgtcttagagtccaaaggttctcgatcaatatatagcccccgg
cctactgaacaggtggaagagcttttacgcaggcaacgcatgaaggaggcagaagaaaaa
gagtttcaggagtttattcagttgttgaagtctgccaagaaggcgcctagtcacgccaag
cccctcaaatcttcttggctagctgatgataaagtgcaagataatatacgcgcacttgaa
gcttatgctattgatgcatgggcaagcactgaccagcggaaaattgccggaacgatctta
aagtccatggggttacagaaaacatctgtctcggcactaaaccttctcatagatattgga
tattttcctgtacatgtcaatcttgatctgcttaagctaaatcttccaacccaccactca
gaagctatcactgaagctgctgaagttcttctttcagaatcatctgatattgatgcggtt
aggaggattgatctcacacacttgaaggtttatgcaattgatgttgatgaggctgatgag
cttgacgatgccctcagtgcaactagattgcaggatggacggataaagatctggatacat
gttgctgatcctgctagatatgttacacctgggagtaaagtggacagagaggcacgcaga
aggggaacttctgtctttctgcctacggctacttatccaatgtttccagagaagcttgcc
atggaaggaatgagtttaagacaaggagaaaactgcaatgctgtctctgtatctgttgtc
ctgcgtcctgatggctgtattgcagaatattcagtagagaactcaatcatcagaccgacc
tatatgttgacatatgaaagtgcttctgagctgcttcacttgaacctagaagaagaagct
gaactaagattgctgtctgaggcagctttcattcgctctcagtggcgcagtgaacagggt
gcagtggacacaactactctagaaactcgtatcaaagtggttaatcctgaggatccagaa
cctttgataaatctctatgtagaaaatcaagcagaacgagcgatgagacttgtcttcgaa
atgatgattctttgtggggaggttatagcaacgtttgggtctcagcataatatcccattg
ccatatagaggacagccacagtcaaatattgatgtatctgcatttgcgcatcttccagaa
ggacccgtacgttcgtcatccattgtcaaagtaatgcgtgctgcagaaatgaattttaga
tgtcctgttcgacatggagtgcttggaattcctggttacgttcagttcacatctcccatt
cgtcgatacatggatcttactgcacactatcagattaaggcttttcttcgaggaggtgac
aattttccattctcggctggtgagttagaaggtatagcagcatctgtaaacatgcaaagc
aaagtggtgaggaaactctcaaacagcagtctccgctattgggtaatagagtttctcaga
agacaacaaaagggtaaaaagtacaccgcattgatcttgagatttgtcaaagaccggatt
gcatcacttttgttggttgaggtgggttttcaagcaactgcgtgggtgtcagaaggcaaa
caagtgggagatgaaatccaagttaaagtagaagaagctcatccccgcgacgatcttatt
cttttcaaagaggttatctaa
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