Capsella rubella (pink shepherd's-purse): 17883986
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Entry
17883986 CDS
T02984
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
17883986
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
17883986
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
17883986
NCBI-ProteinID:
XP_006287194
UniProt:
R0FD83
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSKSNEAAMLVAPSPPPPPFDPTKPSTPISFPIKTLQDLKSRSYFDSFHFSFNRSSVALR
RNIGVLPDRSRLLVCHDMKGGYVDDKWVQGCGNNAGYAIWNWYLMDVFVYFSHSLVTLPP
PCWTNTAHRHGVKVLGTFITEWDEGKATCKELLATKESAQMYAERLAELAAALGFDGWLI
NIENVIDEVQIPNLLVFVSHLTKVMHSSVPGGLVIWYDSVTVHGLLEWQDQLTDNNKPFF
DICDGIFMNYTWKENYPKASAKIAGDRKYDVYMGIDVFGRGTYGGGQWTANVALDLLKRN
NVSAAVFAPGWVYETEQPPDFHTAQNKWWSLVEKSWGIVQTYPQVLPFYSDFNQGLGSHI
SLGGKILSDAPWYNISCQSLQPLLEFHEGKNSDIMQVTVDGGEASYNGGGNVSFRGKLQR
NAHFTARLFKPHLELPASPISISFSVKSDKRSELSILLHFSSPSHEKKSFLMAPNESSNR
FGDMFLPCHVTSTQTTSDWMVHETNLVLDGHTLSEISAFCSRPDDLTEETNTLEYFALLG
HISIKSQQKTKLFPLASSWVIEAHHIKFVPGDSGSKTLSCKLEWRLKHPEEDIAFTRYNV
YAENLKSSEYRARKVMEEPRSEKVFLGTAHVDAYYVSGLVVGSDLKGVRFVVQTCGEDGT
WQELDHSPNLLVEVERPSSKLCCCGLI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatccaacgaggcagctatgttagtagcgccatcaccaccacctccacctttc
gatccgactaaaccatcaacgcccatctctttcccaatcaaaactcttcaagacttaaag
tctcgctcttacttcgattcttttcacttctcctttaaccgttcctccgtcgctctccgc
cgcaacattggcgtcttgccggatcgatctaggctcttggtttgccacgacatgaaagga
ggctacgtcgacgacaagtgggttcaaggatgtggaaacaacgctggttacgcgatctgg
aattggtatttgatggacgttttcgtttacttctcacactcgcttgtgactcttcctcct
ccttgctggaccaatactgctcacagacatggcgtcaaggtattggggactttcatcaca
gaatgggacgaaggtaaagctacctgcaaagagttgttggcgacaaaggagtctgcgcag
atgtatgcagagcgtttggcagaacttgctgctgctcttggatttgatgggtggttgata
aatattgagaatgtaatagatgaagttcagattccaaatttactggtttttgtaagccat
ctaacaaaagttatgcattcatctgtacctggaggtttagttatatggtatgatagtgtc
acggttcatggtcttcttgagtggcaagatcagttgactgacaataataaaccttttttt
gatatttgtgatggaatattcatgaactatacatggaaggagaactatcccaaagcatca
gctaaaatcgccggggatagaaaatatgatgtatatatgggaatagatgtttttggtcgg
ggcacttatggtggtgggcaatggactgcaaatgttgcccttgatttgctgaagagaaac
aatgtatcagctgccgtatttgctcctggatgggtatacgaaaccgagcaaccaccggat
tttcacacggcacagaataaatggtggtcacttgttgagaagtcatggggaatagttcaa
acatatccgcaagtcctacctttctactcagattttaatcagggccttggttcccatatt
tctctcggaggtaaaatattatcagacgctccctggtacaatatttcatgccaaagtctg
cagccactcctagaatttcacgaaggaaagaattcagatatcatgcaagtcaccgttgat
ggtggagaagcatcttataatggaggagggaacgtcagtttcagaggaaaactacagaga
aatgcacatttcacagcaagactcttcaaacctcatcttgagctccctgcttctccaatc
tcaatctccttttctgtgaagtcagataaaagatctgaactcagcattctgctccatttt
tcatctccttcacatgagaaaaagtcttttcttatggcgccaaatgaatctagcaacaga
tttggcgacatgttcttgccatgtcacgtcacatctacacagaccacatccgattggatg
gtgcatgaaacaaaccttgttctggatgggcacacactgagtgagatctctgccttctgc
tccagaccagatgatctcacagaagaaacaaacacactagagtattttgcattgcttggt
catatctccatcaagagccagcaaaaaaccaagctttttcctttggcatcatcatgggtt
atcgaggctcatcacataaagtttgtaccgggtgattctggctccaagaccttaagttgt
aagctagaatggagactgaagcaccctgaagaagatatcgcctttacaaggtataatgtg
tatgcagagaatctgaaatcgagtgagtacagggcaaggaaggttatggaagaaccgaga
agcgagaaagtgtttctcggaacagctcatgttgatgcttattatgtctctggtctggtc
gttggatcagatttgaagggagtccggtttgtagttcaaacctgtggtgaagatggtaca
tggcaggagctggatcattcacctaaccttctggttgaggtagaacgtccaagttcaaag
ctttgttgttgtgggttaatttga
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