Capsella rubella (pink shepherd's-purse): 17884004
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Entry
17884004 CDS
T02984
Name
(RefSeq) phytoene synthase, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00906
Carotenoid biosynthesis
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
Module
crb_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
17884004
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
crb01006
]
17884004
Enzymes [BR:
crb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
17884004
Prenyltransferases [BR:
crb01006
]
Terpene biosynthesis
Squalene/phytoene synthase
17884004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
17884004
NCBI-ProteinID:
XP_006287812
UniProt:
R0H771
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MSSSVAVLWVAASPNPDPLNNCGLVRVLESSRLFSRCQNQRLDKGRRKQTTTTWTSSSFV
TNQRRRSGAVSSSLVASPSGEIALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDV
VLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPN
ASHITPMALDRWEARLEDLFRGQPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKS
RYKNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDV
GEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTEL
SAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKAKKIAALPLAYAKSILQTSSSR
LSI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttctgtagcagtgttatgggttgcggcttctccaaatccagacccactgaac
aattgtgggttggtaagggttctagaatcttctagactcttctctcgttgtcagaatcag
agactagacaaaggtaggaggaagcagacaacaacaacttggacctcttcttcatttgta
acgaaccaaagaagaagaagtggtgctgtgtcttcaagcttagttgcaagtccttcagga
gagatagccctctcatctgaagagaaggtttacaatgttgtcttgaaacaagctgctttg
gtgaacaaacagcttagatcttcttcttatgatcttgatgtcaagaagcctcaagatgtt
gttctccccgggagtttgagtttgcttggtgaggcttatgatcgatgcggtgaagtttgc
gctgaatatgctaaaactttttatctcgggactttgcttatgacacccgaaaggagaaag
gcgatttgggctatctatgtttggtgtagaagaactgatgaactcgttgacgggcctaat
gcttcacatataactccaatggcgttagatagatgggaagcaaggttagaagatcttttc
cgtggccaaccttttgatatgcttgatgctgctcttgctgataccgttgctagatacccg
gttgacattcagccatttagagacatgatcgaaggaatgagaatggacttgaagaaatcg
aggtacaagaacttcgatgatctctacctttactgctactatgttgcgggaaccgttggt
ttgatgagtgttccagttatggggatcgatcctaagtcgaaagcgactacggaaagtgtt
tacaacgctgccttggcccttgggatagccaatcagcttactaacatactcagagacgta
ggcgaagatgcgagaagaggaagggtttatctacctcaagacgaattggctcaggctggt
ctctcagatgaagacatattcgccgggaaagtcactgacaaatggagaaactttatgaaa
atgcagcttaagcgagcaagaatgttctttgacgaagctgagaaaggcgtcaccgagctc
agtgctgctagcagatggccggtatgggcatcgctgctgttgtacaggagaatattggac
gagattgaagccaatgattacaacaatttcacaaagagagcttacgtggggaaagccaag
aaaattgcagcattgccattggcttatgctaagtcaatactacagacttcaagttcaaga
ctgtccatatga
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