Capsella rubella (pink shepherd's-purse): 17884263
Help
Entry
17884263 CDS
T02984
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04120
Ubiquitin mediated proteolysis
crb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
17884263
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
17884263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17884263
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
17884263
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
17884263
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
17884263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
WD40_like
YNR034W-A-like
WD40_RFWD3
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
17884263
NCBI-ProteinID:
XP_006287966
UniProt:
R0GVD0
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MNTLHPPHQEQEEEQEQEEARYEWDLSLSTVVSSSSSSASDVIGAIEFDPTDNIVATAGI
SRKIRFYGLPSLLRTSAAVSGGGGGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIG
SGDYDGVVTEYDLEKRTPVFERDEHGGRRVWSVDYTRNGGGSVVGASGSDDGTMQVWDPR
CPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDMRKLVDPALTLEGH
TKTVSYVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFG
CGSENNKVFVYDKRWGKPVWIDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDG
VLQVYVGKTKP
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcttcatcctccgcatcaagaacaagaagaagaacaagaacaagaagaagct
agatacgaatgggatctttctctctccaccgtcgtctcttcctcttcctcctccgcctcc
gacgttatcggtgctattgagttcgaccccactgataacatcgtcgctaccgccggtatt
tctagaaagattcgtttttacggcctcccttctctcttacgcaccagcgccgccgtctct
ggaggaggaggaggcgtttctttcgtcgatcaagcgacagcttgcgagtattacatctgt
acgccggcgaagctcagtagtctacggtggagacccgggtcgggcggtcgtgtcatcggg
tcgggagattacgacggcgtagtgaccgagtacgatctcgagaagagaacgccggttttc
gaaagggacgagcacggaggccgccgcgtatggagcgtggattacactcgcaacggcggc
ggttctgtggtgggcgcgtcgggatcagacgacgggactatgcaggtatgggatccgagg
tgtccgccggaggaatctgtcggcgtagtacgaccggcggggatatgccggagcgccgtt
tgttgcgtggagttcgatccatccggcggaccggcggtggccgtgggatgcgctgatcgg
aaagggtacgtttacgatatgaggaaactcgttgacccggcgttgactttggaaggacac
acgaaaacggtgtcgtatgtgaggttcctagacggcggtacggtggtgacggcaggcacg
gacgggtgtctgaagctgtggagcgtggaggacgggagagtgattcgcacgtacgaaggg
cacgtgaacaatagaaacttcgtggggttatcggtgtggagaaacggcgcgctgttcgga
tgcggatcggagaacaacaaggtgttcgtgtatgataagaggtgggggaagccggtatgg
atagacgggttcgaaccggtagggatgaattcgggttcggataagcggttcgtgagtagc
gtctgttggaggcaatcaggtgtggaccagtgcaccctagtggctgggggatctgatgga
gtactacaggtttacgtgggcaaaacaaagccatag
DBGET
integrated database retrieval system
