Capsella rubella (pink shepherd's-purse): 17884513
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Entry
17884513 CDS
T02984
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
17884513
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
17884513
NCBI-ProteinID:
XP_023636275
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MLPRFDPTNPEACLSLLEDVTTNVKQIQDSVLEAILSRNAHTEYLRGFLNGQVDKQSFKK
NLPVVTYEDIKPYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTEDLVQRIS
LASLYRPLLYKHIEGVKETKSLLFYFVSRESETASGILVRTMITSVLKSVTPETKYIWDQ
TQVSPHAISTCADTTQSMYCQLLCGILQRDNVGRLGAPFASTFLKVIKFLEDHWPELCSN
IRTGRLSDWITDAQCVSGISKFLTAPNPELASLIEQECSKTSWEGIVRRLWPKAKCIEAI
VTGSMAQYIPLLEFYSGGLTVISTLYGSSECTIGANFNPLCKPSDVSYTIIPSMGYFEFL
EVEKDHQETGHDPMEKHVVVDLVDVKVGHDYEPVLTTFSGLYRYRVGDVLRVTGFYNNAP
QFHFVGRQKVVLSIDMDKTSEEDLLKAVTNAKLLLEPHDLMLMDFTSRVESSPFPGHYVL
YWELGSKVKDAKLEPNPNVLEECCFTIEESLDPVYRKGRKNDKNIGPLEIKVVKPGAFDE
LMNFFVSRGSSLSQYKTPRSVTNEEALKILEANVVSKFLSRKTPTWELHELYSSR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaaggttcgacccaacaaacccagaagcttgcttgtctcttcttgaggatgtt
accacaaacgtaaagcaaattcaagactccgtcttggaagcaatactttcacgtaatgct
catacagagtatcttagaggcttcctcaacggtcaagtcgataagcaaagcttcaagaag
aacctgcccgttgtgacctacgaagatattaagccttatatagatcgtatagctaatgga
gagccgtctgatctcatctgtgatcgacccatcagtgtactcttgaccagctccggtact
tcaggaggagttccaaagttgattcctttgacaacagaggatttggtacagaggatctcg
cttgcatctctctatagacctctactctacaagcacattgagggggttaaagaaacaaaa
tccctcttgttttattttgtgagccgagagagcgagacagcctctgggatattggtcagg
actatgataactagtgttttgaaaagcgtgacgccagaaaccaaatatatctgggatcaa
acacaggtaagcccgcatgcaatttcgacttgtgcagacactactcagagcatgtactgc
cagttgctttgtgggattctacaacgagataatgtaggtcgcctcggtgcaccctttgct
tctacattcctcaaagtaataaagttcttggaagatcactggcctgagttatgctcaaac
attaggactggccgtctcagcgactggatcacagacgctcaatgtgtttcagggatcagt
aagttcctcaccgctccaaatcccgaactagctagcctgattgagcaagagtgcagcaaa
acttcatgggaaggtatagtgaggagactatggccaaaagcaaaatgcattgaagccatc
gttaccggctccatggcacagtacattccattgctggaattttatagcggcggtcttact
gtcatctcaacgctttacggaagctctgaatgtaccatcggtgctaattttaatcctctg
tgtaagcctagtgatgtgtcgtacaccatcattccaagtatggggtacttcgagttcttg
gaggtcgagaaagaccatcaagaaactggtcatgatcccatggagaaacatgtggtcgtc
gatcttgtcgatgttaaagtcggccatgattatgaacctgttctcacaacgttttctggt
ctgtacaggtaccgtgtgggggacgttttaagagtgactggtttctacaacaatgcgcca
cagtttcatttcgtgggaagacagaaagttgttctgagcatcgacatggacaagaccagt
gaagaagacctgcttaaggcagtgacaaacgcgaagctcctgctcgagccacatgacttg
atgctcatggatttcactagccgtgtagagtcctccccgtttccaggacactacgtactc
tactgggaactcggtagcaaagtcaaggatgcaaagctcgagcccaacccgaatgttttg
gaggaatgctgcttcaccattgaggagtctctcgaccctgtttacagaaaaggacgaaag
aatgataagaacattggaccacttgagattaaggttgttaagcctggcgcttttgacgag
ctcatgaacttttttgtgtctcgaggctcttctctgagtcagtacaagacaccgaggtcg
gtgacgaatgaagaagccttgaagatattggaagcgaacgttgtgtccaagttccttagc
cggaaaactccaacgtgggagctacatgagctctactccagccgctaa
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