Capsella rubella (pink shepherd's-purse): 17884542
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Entry
17884542 CDS
T02984
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17884542
Transcription factors [BR:
crb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
17884542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
17884542
NCBI-ProteinID:
XP_006287530
UniProt:
R0H9Z4
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MQMIPGDPFSISSSMGGFVHQETHLHHLQQQIPDLNPNSNPNPNAKPNSSSAKKKRNQPG
TPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIK
KKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKT
CGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLNNNNPVISASNLNFGNDSNV
MNNNPNLPHGFVHRGVHHPDINAAISQFGLGFGHDLSAMHAQGLSEMVQMASTGNHHLFP
SSSSSLPDFSGHQQFQIPTTSTNPNLTLSSSSTSQQSSASLPSLQQHHQTLKDTSFSPLF
SSSSENKPNKPLSPMSATALLQKAAQMGSTRSNSTTAPSFFAGPTMTSSSATASPPPPPP
PPRSSSPMMIQQQLSNNFNTIVSRENHNLAPPPLSGVTTNNVDNNPFQLNRSGLNPVQQM
GLTRDFLGVSNEHHPHQTSRRPFLPQELARFAPLG
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgattccaggagatccattttctatttcatcttccatgggagggtttgttcat
caagaaacacaccttcatcatcttcagcagcagatccctgaccttaaccctaattccaac
cctaaccctaatgctaaaccgaactcttcatccgccaagaagaagagaaatcaacctggc
actccagatccagatgctgatgtcattgctctatcgccaacaacactcatggcaacaaac
agattcgtgtgcgagatctgcaacaaagggtttcaaagggaccagaacttacaactccat
cgccgtggccacaaccttccatggaagctgaagcaacggtccaaacaagaggtgataaag
aagaaagtatacatatgtcctatcaagacttgtgtacaccatgatgcttccagggccctt
ggagacctcactgggatcaagaaacactatagccgcaaacacggcgaaaagaaatggaaa
tgtgaaaagtgttctaagaaatatgctgttcagtctgattggaaggcacatgcgaagact
tgtggcactcgcgagtataaatgtgactgtggcacgttgttctccaggaaagatagtttc
atcacacatagagcgttctgcgacgcattgactgaagaaggtgcgaggatgagttcacta
aataataacaatccggtgatctctgcgtcgaatctgaactttggaaacgattcaaatgta
atgaataataatccaaatctcccacatggatttgttcaccgaggagtacaccatcccgac
attaatgctgctatctctcaattcggtttagggtttggccatgacctaagtgcaatgcat
gcgcaaggtctatccgagatggttcaaatggcctccacaggcaaccaccacctctttccc
tcgtcatcatcgtccctccctgatttctccggccaccaacaattccaaattccaacgacc
tccacaaaccctaatcttaccttgtcatcttcctcgacatcacaacaatcctcagcttca
ctaccatcattacaacaacaccaccaaaccctaaaagacacatctttctcaccactcttc
tcctcttcctctgaaaacaaaccaaacaagcctctctctccaatgtctgccacagctctc
ctacaaaaagctgcgcaaatgggctctactagaagcaattccaccactgctccgtccttt
ttcgctggtccaacaatgacttcatcatcagccaccgcttctcctcctcctcctcctcct
cctcctagatcgtcttctccaatgatgatccaacaacaactcagcaacaacttcaacacc
atcgtctcaagagagaatcacaatcttgctcctcctcctcttagtggtgtaaccactaat
aatgtggataataatccctttcaattgaaccgatcgggtctaaatccggttcaacagatg
ggtctaacccgagattttcttggagtgagcaacgagcatcaccctcaccaaacaagccgt
cgtccgtttttgcctcaagaactcgcaaggtttgctccattgggttga
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integrated database retrieval system
