KEGG   Capsella rubella (pink shepherd's-purse): 17884648
Entry
17884648          CDS       T02984                                 
Name
(RefSeq) glutamate--tRNA ligase, cytoplasmic
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb00860  Porphyrin metabolism
crb00970  Aminoacyl-tRNA biosynthesis
crb01100  Metabolic pathways
crb01110  Biosynthesis of secondary metabolites
crb01240  Biosynthesis of cofactors
Module
crb_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:crb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    17884648
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    17884648
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:crb01007]
    17884648
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:crb03016]
    17884648
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:crb02048]
    17884648
Enzymes [BR:crb01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     17884648
Amino acid related enzymes [BR:crb01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   17884648
Transfer RNA biogenesis [BR:crb03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    17884648
 Prokaryotic type
   Other AARSs
    17884648
Prokaryotic defense system [BR:crb02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    17884648
SSDB
Motif
Pfam: tRNA-synt_1c tRNA-synt_1c_C tRNA-synt_1c_C2 GST_C Arc1p_N_like GST_C_3 GST_C_2 GST_C_6 tRNA-synt_1e GST_C_7
Other DBs
NCBI-GeneID: 17884648
NCBI-ProteinID: XP_006286834
UniProt: R0FCB4
LinkDB
Position
Unknown
AA seq 719 aa
MDGMKLSFPPESPPLSVIVALSLSASPVVIDSSAAATTVPSFVFSDGRKLSGTTVLLRYV
GRSANKLLDFYGHDAFDSSQIDEFVDYASVFSSGSEFENACGRVDKYLESHTFLVGDSLT
IADVAIWSALAGTGQRWESLRKSKKYQSLVRWFNSILDEYSELLNKVLATYVKKGSGKPV
AAPKAKDSQQASKADANDKSKPEVDLPEAEIGKVRLRFAPEPSGYLHIGHAKAALLNKYF
AERYQGEVIVRFDDTNPAKESNEFVDNLVKDIGTLGIKYEKVTYTSDYFPELMQMAEKLM
REGKAYVDDTPREQMQKERMDGIDSKCRNHSVDENLKLWQEMIAGSERGLQCCVRGKFNM
QDLNKAMRDPVYYRCNPMSHHRIGDKYKIYPTYDFACPFVDSLEGITHALRSSEYHDRNA
QYFKVLEDMGMRQVQLYEFSRLNLVFTLLSKRKLLWFVQTGLVDGWDDPRFPTVQGIVRR
GLKIEALIQFILEQGASKNLNLMEWDKLWSINKRIIDPVCPRHTAVIAEHRVLFTLTDGP
DEPFVRMIPKHKKFEGAGEKATTFTKSIWIEEADASAISVGEEVTLMDWGNAIVKEITKG
EDGHVTALSGALNLQGSVKTTKLKLTWLPNTNELVNLTLTEFDYLITKKKLEDDDEVADF
VNPNTKKETLALGDSNMRNLKCGDVIQLERKGYFRCDVPFVKSSKPIVLFSIPDGRAAK
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggatgggatgaagctttcgttcccaccggaaagtccaccactttcagtcatcgttgct
ctctctctctcagcctctcccgttgttattgattcaagcgcagccgcaactacggtccct
tcttttgtcttctccgatgggaggaaattgagtggaaccaccgttcttcttcgctatgtt
ggtcgatcagctaacaagcttcttgatttctatggccacgatgcttttgattcttcccag
attgatgagtttgtagattacgcttctgtcttctcctctggttcagagtttgagaatgct
tgtggtcgtgtcgataagtatcttgagagtcacacgtttcttgttggtgattctcttacc
attgctgatgttgctatttggtcagctctggcaggaactggccaaagatgggaaagtttg
aggaaatcaaaaaagtatcagagtttggttagatggttcaactcgattttagacgagtat
agcgaacttcttaacaaggttttagcaacttatgtaaagaaaggctcagggaagcctgtg
gctgcacccaaggctaaagacagccaacaagcctcgaaagcggatgcaaatgataaaagt
aaacctgaagtggacttgccggaagcagaaattggaaaggttcgacttcggtttgctcca
gagccaagtggttaccttcacattggacatgccaaggctgcgttgctgaacaagtatttt
gctgagcgttaccaaggggaagtgattgtgcgttttgatgatactaaccctgctaaagaa
agcaatgagtttgtggataatctcgtgaaagatattgggaccctggggatcaagtatgag
aaagtgacatacacttcggattactttcctgaactgatgcaaatggcagaaaaactgatg
cgtgagggcaaagcatatgttgacgacacaccaagggagcagatgcagaaagagaggatg
gatgggattgattcaaagtgcaggaatcatagcgttgatgagaatttgaagctatggcag
gaaatgattgcgggaagtgagagaggattacagtgctgtgttcgcgggaaattcaacatg
caagatctcaacaaagccatgcgcgacccggtttattatcgatgcaatcctatgtctcac
caccgtattggggataagtataagatatatccaacgtatgactttgcttgcccgtttgtc
gattcccttgaaggtataacgcatgcccttcgatctagtgagtatcatgaccggaatgct
cagtactttaaagttctggaagacatgggaatgcgacaggttcagctttatgaattcagt
cggttaaatctggtttttacacttctcagtaagcggaagcttctctggtttgtccagact
ggattggttgatgggtgggatgatccacgcttcccgacagtccaaggaattgttcgtaga
ggtttgaaaatcgaggctctgattcaattcattcttgagcagggggcttcaaagaatcta
aatttgatggaatgggataaactttggtctattaataaaagaataattgaccctgtgtgt
ccgagacacactgctgtcattgcagagcatcgtgtactatttaccctaacggatggtcct
gatgagccgtttgttcgcatgataccaaagcacaagaaatttgaaggtgctggagaaaag
gcgaccactttcaccaagagcatttggatcgaggaagctgatgcgagtgcgatatctgtt
ggtgaggaagtaactttgatggattggggaaatgccatagtaaaggaaattacaaagggt
gaggatggtcatgtcactgcgttatctggtgctttgaatctccaaggatctgtaaagact
acaaaactgaagctcacatggcttcccaacaccaatgaattggtcaatctcacattaaca
gagtttgattatctaattacgaagaagaagctggaagatgatgatgaagttgctgatttt
gtgaatcctaacacaaagaaggaaacattggcacttggtgattcaaatatgaggaatctg
aaatgtggagatgttattcagcttgagaggaaaggctatttcaggtgcgatgtgcctttt
gtcaaatcgtctaagcctattgtcttgttctcgattccagatggaagagcggctaagtga

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