Capsella rubella (pink shepherd's-purse): 17884729
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Entry
17884729 CDS
T02984
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17884729
03036 Chromosome and associated proteins [BR:
crb03036
]
17884729
Transcription factors [BR:
crb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
17884729
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
17884729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
HMG_box
Rttp106-like_middle
HMG_box_2
HMG_WDHD1
CDC45
HMG_box_5
YL1
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
17884729
NCBI-ProteinID:
XP_006290723
UniProt:
R0FNJ0
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MTDGHSFNNISLSGRGGTNPGLLKINSGGIQWKKQGGGKAVEVDKSDVVGVSWMKVPKNN
NQLGVKTKDGLDYKFIGFRDQDVASLTSFFQSSYGKTPQEKQLSISGRNWGEVDLNGNTL
TFSVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTAGANEKDSLMEIGFHIPNSNTQF
VGDENRPPAQVFNDEIKLMADVVAGAEEAVVTFESIAILTPRGRYSVELHLSFLRLLGQA
NDFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELSI
SDDLMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSAQDGFAVKSSLKAED
GVLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIKLKTDHEHLFRNI
QRNEYHNLYSFISSKGLKIMNLGGAGSADGVAAVLGDNDDDDAVDPHLERIRNQAADESD
EEDEDFVMGEDDDGGSPTDDSGEDDSDASEGGGGEKEKSIKKEPKREAPSSSKGLPPKKK
VLATEEGSSKKKKQKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDK
WRQMSAEEKEPYEAKAQVDKQRYKDEISDYKNPPPMNVDSGNESDSH
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccactccttcaataacatctctctcagcggccgcggcggaacgaaccct
ggacttcttaagataaactctggaggtattcaatggaagaagcaaggtggtgggaaagct
gtggaagttgataaatctgatgttgttggtgttagttggatgaaagttccaaagaataat
aatcaattgggagtcaaaaccaaagatgggttagactataagttcattgggtttcgagat
caggatgttgcaagtctgaccagctttttccagagtagttatggtaaaacaccacaagag
aaacagttgtctattagtggtcgaaattggggagaggttgatttgaatgggaatacatta
accttttcggttggttcgaagcaagcttttgaagtatccttagctgatgtttcgcagact
cagcttcaaggaaaaaatgatgtcatattggagttccatgttgatgataccgctggtgct
aatgagaaagactcgttgatggagataggttttcatattcctaactccaacacccagttt
gttggtgatgaaaaccgtccgcctgctcaagtttttaatgacgaaatcaagttaatggct
gatgttgttgctggagctgaggaggcagttgtcacattcgagagtattgcaatcctcaca
cccaggggtcggtacagtgtggaacttcacctttctttcttacgtctgctaggacaagct
aatgactttaaaatccaatacagtagtgttgtccgattgttcttgcttcctaagtcaaat
caaccacacacctttgttgttatctctctagacccaccaatccggaaaggtcagacaatg
tacccccacattgtgatgcagtttgagactgacaccgtcgtcgaaagtgaactgtcaatt
agtgatgatcttatgaatacaaagttcaaggacaagctggagcgatcatataagggtctc
attcatgaagtattcaccaccgtgttgcgttggttgtctggtgcaaagatcactaaacca
gggaagttccgcagtgcccaagatgggtttgcagtgaaatcatctctgaaggcagaagat
ggtgttctttatccacttgagaagggctttttctttttacctaaacctccaacgcttata
cttcatgatgagattgactatgtagagtttgaaaggcatgctgctggtggtgctaacatg
cattacttcgatcttctcataaaactgaaaactgatcatgaacatctgttccgaaacatt
caaaggaatgagtatcacaatctctattccttcataagctccaaaggtttgaagattatg
aaccttggaggtgcgggaagtgcagacggtgttgctgctgttcttggggataatgatgat
gatgatgctgttgaccctcatcttgagcgtatcaggaaccaagctgctgatgagagtgat
gaggaggacgaagactttgttatgggtgaggatgatgacggtggttcaccaactgatgat
tctggcgaggacgactctgatgctagtgaaggcggtggaggagagaaagagaaatctatc
aagaaggaacccaagagagaagctccatcatcttctaaaggattgcctcctaagaagaaa
gtgttagccacagaagaaggcagtagtaagaagaagaagcaaaaaaagaagaaagatccc
aacgcaccaaaaagagcaatgtctggtttcatgttcttctctcaaatggaaagagacaac
ataaagaaggaacacccaggaatagcatttggagaggtagggaaggttcttggagataag
tggcgtcaaatgtcagccgaggaaaaagagccgtatgaagccaaagcgcaagtcgacaag
cagcgatacaaggatgagataagtgattacaagaaccctccaccgatgaacgtggactca
ggaaacgagtctgacagtcactaa
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