Capsella rubella (pink shepherd's-purse): 17885005
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Entry
17885005 CDS
T02984
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
17885005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17885005
03029 Mitochondrial biogenesis [BR:
crb03029
]
17885005
Membrane trafficking [BR:
crb04131
]
Autophagy
Autophagosome formation proteins
ULK complex
17885005
Atg1 complex
17885005
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
17885005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
17885005
NCBI-ProteinID:
XP_006290272
UniProt:
R0HDQ9
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MDFPENLPSDIGRLEQIVSHFFPKALHIVLNSRIPSLQTRGRTRERLSGLNVRKSDKWFN
LVMGDRPAALEKLHSWHRNILDSMIIDIILVHPISSDNLHDDDHHGDSVVRSAETVIERW
VVQYENPLIMSPQSSESATRYQKVYKKSIIMLRSLYAQTRLLPAYRISRQLSSSLASSGY
DLIYKVSSFSDILSGPVTETMKEFRFAPVEVPPGRLCASVTYRSDLSDFNLGAHITLPPR
IITDYVGSPATDPMRFFPSPGKSIEGTSFIGRAGRPPLTGSSAERPHSWTSGFHRPPAQY
ATPNQSFSPAHSHQFSPGLHDFHWSRTDSFGDNHQLSPPFSPSGSPSTPRYISGSNSPRI
NVRPGTAPVTIPSSATFNRYVSSNFSEPSRNPLPPFSPKSTRRSPSSQDSLPGIALYRSS
RSGESPSGLMNQYPAQKLSKDSKYDSGRFSGLLSSSGSPRFGFSRSPSRLSSQDDLDDPD
CSCPFDFDDVDESGLQYSQSLDRRKASSSISQSLPIGRKSSQDAAVGVLVHMLKTAPPLR
QDSSTYMASMSGVQREGSVSVSVSGTESEYSIGRSTSDALEELRNYKQLKDLLLSKSKSG
SGATRVH
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggattttccagagaatctgccttcggatattggaagattagagcagattgtttctcat
ttcttcccaaaggcattacacatcgttctcaattctagaatcccttcgttgcaaactcgt
ggtcgtactcgtgagcgtttatcaggtcttaatgttaggaaaagtgataagtggttcaat
ctagttatgggggatcgtcctgctgcgttagagaagttgcattcttggcataggaatatc
ttggattctatgattattgatattatacttgttcatccgatttcgagtgataatttgcat
gacgatgatcatcatggtgattccgttgttagatcagctgagactgtgattgagaggtgg
gttgttcagtatgagaatccattgattatgtctcctcagagttctgagtctgctactcgt
tatcagaaggtttacaagaaatctatcattatgttgcggtccctttatgcgcagactcgg
cttctccctgcgtatcgtatctctaggcagctgagttcgtctcttgcctcttctggttat
gatctgatttacaaggtttcatctttcagcgatatattatctggtccagtgacggaaaca
atgaaagagtttcgttttgcacctgttgaagtgcctcctggtcggctttgtgcctcagtt
acttaccgttctgacttatctgatttcaatcttggtgctcacatcacattgcctccaaga
attataaccgattatgtaggaagtcctgcaactgatcctatgaggtttttcccgtctcca
gggaaaagtattgaaggcacatcttttattggtagagctggtcgtcctccattgactggt
tcatctgctgaacgtccacatagctggaccagcggctttcatagacctccagctcaatat
gcaacaccaaaccaatctttttcgcctgctcattcacatcaattttcacccgggttacat
gatttccactggtcacgtacagattcttttggtgacaatcaccagctttcacctcctttt
tcgccatcagggtctccctctactccaagatacatttcagggagtaacagtccacggata
aatgtgagaccagggactgctccagtgaccattccttcttcagccacattcaatagatac
gtctcatctaacttctctgagccaagtaggaatccacttcctcccttttcccccaaaagc
acaagacgctccccttcatcgcaggattctttgcctgggattgcgttgtacaggagttcg
agaagtggagagtctccttctgggttaatgaaccagtaccctgcccagaagctgtcaaag
gacagcaaatacgattcaggccgcttctcaggacttctgtcgtcaagtggctcaccaaga
ttcgggttttctaggagccccagtcgattatcgtcccaagacgacttggatgaccctgat
tgttcatgcccttttgatttcgatgatgttgacgagtcaggacttcagtacagccaaagt
cttgaccggcggaaagcttcaagctctatatcacagtcactacctatagggagaaagtca
tcacaggatgcagcggttggtgttctggttcacatgctgaagacagcaccgccattacga
caagactcaagcacttacatggcgtcaatgtctggggttcagagagaaggttcagtgtca
gtgtcagtatcaggtactgaatctgaatattccattggtcgaagcacatcagatgcacta
gaggagctgagaaactacaagcaactcaaagacttgcttctttcaaaatccaagagtgga
tctggagcaactcgtgtccactga
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integrated database retrieval system
