Capsella rubella (pink shepherd's-purse): 17885006
Help
Entry
17885006 CDS
T02984
Name
(RefSeq) eukaryotic translation initiation factor 4G isoform X1
KO
K03260
translation initiation factor 4G
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17885006
03012 Translation factors [BR:
crb03012
]
17885006
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
17885006
mRNA cycle factors
Stress granule specific factors
17885006
Translation factors [BR:
crb03012
]
Eukaryotic type
Initiation factors
eIF-4
17885006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
DUF7018
Motif
Other DBs
NCBI-GeneID:
17885006
NCBI-ProteinID:
XP_023638991
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MSYNQSRPDRSETQYRRTGRSTGNHHQPQQQRSSPAAGYGKGAGAPGSAAPAPSTYVDSN
RSFKKPSNAQGGGGGQPRVNLPPVNHSISKDGLHPNNHNAPYRSQGLSGEPVAGGTPNPT
DSFNRNSGPIPKAPTSQPSKNHEIPNTAKASGSGDASQAFSFQFGSIAPDLMKVPARTSS
APPNMDEQKRAQMQQASLRTATNVPASVPKKDLSNKGADNQSMRKEGINPSSEKADNKVP
HISPPSHTQKSPITNIRMPSVQTPYQHAQVPHPVHFGGPNMHMQPPVTATSFQMPMPMAL
SLGNTPQIPPQLFFQGLPSHPMHHQGMMHQAQGHGFATPMGAQVHPQLSHVGVSLNPQYP
QQQGGKFGGARKTTPVKITHPDTHEELRLDRRGDPYPEGESAASKQHSNTPPRSQPSPFT
PRPVNLVQPSYNSNTMIYPPVSVPLNSGPMSSAQAPRYHFPVIDGPQRVQLINQPAHTAP
QLIRPVAPGHVASDSSSSMKARNTQNMMSSALPANAKLSVKPVGASEKLGSPKARSHGEV
NISLSQKDVETGSLSSSQQPKPFVVSGVPNSSALQAKSSVETAPVPTTEIRRAERVNESI
SVEDQICKVEPPHSLTEDREQAMPESLVSDPETYSVAAKENSSLPASSGFKNQLMEVSPT
SDAPNSDSVDTSIDKSMQGSGHATSEISGSSPQEKDLKCDERTVSDKLVERSVISDEKHE
TVSGVLEKAQNEVDGVTEVCPDSENFAEVTDDTNSELPHSTHGQSSTVPLGHSETLFRHH
GVENSGDSLISPPVMLSKDKSASESNTRRNTSTKGKKKIKEILQKADAAGTTSDLYMAYK
GPEEKKDRKMPLESSNVVHDVLDQKLPPAIPQAAAEATVDAEPIKNEPEDWEDAADVSTP
KLETSDSSLNAKKGSSDEVRDSCSNTEKKYSRDFLLKFADLCTALPEGFDVSPDIANGLI
FVYMGTSHHEHDSYPTPGKVMDRQGSGARLDRRPSNMVVDDRWTKNQGSLPAGYGGNMGF
RPGQGVNSGVLRNPRMQGPIMSRPIQPLGPMGGMGRNTPDLWQRGSNFHQKGIISSPHAH
MQVMHKAERKYQVGTVADEEQAKQRQLKGILNKLTPQNFEKLFEQVKNVNIDNAGTLSGV
ISQIFDKALMEPTFCEMYADFCVHLSGALPDFNEDGEKITFKRLLLNKCQEEFERGEKEE
EEVSRVAEKGQVEQTEEEREEKRLTVRRRMLGNIRLIGELYKKRMLTEKIMHACIQKLLG
NNQDPHEENIEALCKLMSTIGVMIDHSKAKIHMDAYFEQMKMLSCKQELSSRVRFMLINA
IDLRKNKWQERMKVEGPKKIEEVHRDAAQERQTQANRLSRGSSMNSSARRGHMEFSPRGG
GGMLSPPSAQMGGFHGPPQGRGFSNQDIRFDERPPYEPTRLVSMPQRSVGDEPITLGPQG
GLGQGMSKRPTVVSNTFHSDATHAGGGDARRTAGGLNGFGSQRPASPVTHGRSSPQERGT
AYVHREFASLSRASDPSPEVSSARPVLQGPSSTVNSPRENTLSEERLHNMSLSAIKEYYS
ARDEKEIGLCMKDINSPAYHPTMISLWVSDSFERKDKERDLLAKLLVNLVKSADNALTEV
QLVKGFESVLKTLEDAVNDAPKAAEFLGRIFGKSVTEKVVTLTEIGRLIREGGEEPGSLI
EFGLGGDVLGSVLEMIKAEAGEEALAEIRRSSGLRIEDFKPLAPSRSKILEKFT
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaatcaatcaaggcccgacagaagcgagactcaataccgtagaactggtcga
tccaccggtaaccatcaccaaccgcagcaacagcgatcttctcccgccgccggttatggt
aagggagccggcgctcctggttctgctgcgcctgccccttccacttatgtagattctaat
cgcagttttaagaagcccagcaatgctcaaggaggaggaggagggcagccgagggtcaat
ttaccacctgtgaatcattcgatttctaaggatggtttgcatcctaacaatcacaatgca
ccctatcgctctcaaggactttctggtgaaccggttgctggtggaacacctaatccaact
gattcattcaacagaaacagtggacctattccgaaggctccaacatctcagccttccaag
aaccatgagatccccaacacagctaaagcctctggatctggagacgcttctcaagcattt
tctttccaatttgggtctattgctcctgatttgatgaaggttcctgctcgaactagctca
gcacctccgaatatggatgagcagaaacgtgcacagatgcagcaagcttctttaagaaca
gcgacaaatgttcctgcttctgtacccaaaaaagatttatcaaataagggtgcagataat
cagtcgatgaggaaagaggggatcaatccatcgagtgaaaaagctgataataaagtccca
catatatctcctccaagtcatacgcagaagtctccaattacaaatattcgcatgccttct
gtgcagacaccatatcagcatgctcaggttcctcaccctgtacatttcggtgggccgaat
atgcatatgcagcctcccgtgactgcaacctcgtttcagatgccaatgccaatggcatta
tctttgggaaatacacctcaaatcccaccgcagttgttttttcagggtcttccatcacat
ccgatgcatcatcagggtatgatgcatcaggctcagggacatggttttgcaactccaatg
ggtgctcaggttcatcctcagttaagccacgtgggtgtgagtttgaacccacaatatccc
cagcagcaaggaggaaaatttggtggggcacgcaagacgacgcctgtaaagattacacat
cctgacacacatgaagagctgaggcttgatagacgtggtgacccatatccagaaggcgaa
tcagcagcttcaaaacagcattctaacacaccccccagatcacagccatcaccatttact
ccacgaccagtcaatctggtgcaaccctcatataactccaatactatgatatatcctccg
gtttccgtacccttaaatagtggtcctatgtcctctgctcaggcaccaagatatcatttc
cctgttattgacgggcctcagagagtacaacttattaaccaacctgctcataccgctccc
cagcttatcagacctgtagctccgggacatgttgcatctgattcttcttcctctatgaaa
gcacgcaatacccaaaatatgatgtcatctgctttacctgcaaacgcgaagttatcagta
aagccagttggggcttctgaaaagcttggatcaccaaaagccaggtcacatggagaagtt
aacatatctctgtcgcaaaaggacgtggagacaggttcattgagctcttcacagcagccg
aaaccttttgttgtctctggagtaccaaattcgtctgctctgcaagcgaaatcatctgtg
gagactgctccagttccaacgactgaaatcagaagagcggaaagggtgaatgagtctatc
tcagttgaagatcagatatgtaaggtggaaccccctcatagtctgactgaggatcgtgaa
caggctatgccagaatctcttgtctctgatcccgaaacatattccgttgctgccaaagaa
aattcgtcactcccagctagcagtgggtttaaaaatcaactcatggaggtgtctcctaca
tctgatgctccaaattctgactcagtagatacaagtattgacaaatctatgcaagggtca
ggccatgccacatcagaaatttctggttcttcacctcaagagaaagacctaaaatgtgat
gaacggactgtttcggacaagctcgtagaaaggtctgtaatttcagatgaaaaacatgaa
acagtgtcaggcgtgcttgagaaggcacagaatgaggtagatggtgtcacagaggtttgt
ccggactctgaaaattttgctgaagttacagatgatacaaactctgagcttccacattct
actcatggtcagtcatctaccgtcccccttggacattcggaaacattattcagacatcat
ggtgtagaaaattctggcgatagtttgatctctcccccagttatgctttccaaagataaa
tctgcttctgaatcgaacacaagaagaaatacttctacgaaaggaaagaagaagattaaa
gaaatccttcaaaaagcagatgctgcggggacaacttctgatctttatatggcttacaaa
ggccctgaagaaaagaaagatagaaaaatgccgttagagagctcaaatgttgttcatgat
gttttggaccagaagctgccacctgccatacctcaggctgctgctgaagccactgtggat
gctgaaccaattaaaaatgaaccagaagactgggaagatgcagctgatgtttctacacca
aagttggaaacttcagattcttcattgaatgctaagaaaggttcttcagatgaggtcaga
gacagctgcagcaatacagaaaagaagtactctcgggatttccttcttaagtttgcagac
ctgtgtactgctctccctgagggatttgacgtttcgcctgatattgcaaatggcttgatt
tttgtttatatgggtacatctcatcatgaacatgattcttatcctactcctggaaaggtt
atggatcgccaaggaagtggtgctcgattagatcgtcgtcccagcaatatggttgttgat
gatagatggacgaagaatcagggttctcttccagcaggatatgggggtaacatgggtttc
cgacctggtcaaggagtaaactcaggagttttaagaaaccctcgtatgcagggacctatt
atgtctagaccgatacaacctctgggtcctatgggaggaatgggcagaaatacccctgac
ttgtggcagcgtggttcaaatttccatcaaaaaggaattatttcttctccacatgctcat
atgcaggtgatgcacaaagccgagagaaaataccaagtgggtacagttgcagatgaagaa
caagcaaagcaaaggcaattaaagggcatcctgaacaagttgaccccgcaaaactttgag
aaactgtttgagcaagttaaaaatgtgaacattgacaacgctggtacactttctggtgta
atttcacagatatttgacaaagccttgatggagcctaccttctgtgagatgtatgcagat
ttctgtgtacatctgtctggggcgttacctgattttaatgaggatggtgaaaagattacc
ttcaaaagattgcttctcaataaatgtcaggaagaatttgaaagaggggagaaagaagag
gaggaagtgagtagagttgccgaaaaaggacaagtagaacaaactgaggaggagcgggaa
gagaaaagactcacggtgcggaggagaatgctcggtaatattagacttattggtgagtta
tacaagaaaaggatgttgactgagaaaatcatgcacgcatgcatccagaagttgctcggg
aataatcaggatccacatgaagaaaatattgaggctctgtgtaaactaatgagtactata
ggagttatgatcgatcatagcaaagccaagatccatatggatgcatattttgagcaaatg
aaaatgctatcatgcaaacaagaattgtcttctagggtgaggttcatgttgatcaatgct
atcgatttgcgaaagaacaaatggcaggagagaatgaaggtcgaggggccaaaaaaaatt
gaggaggtgcacagagatgctgcacaagaacgccaaactcaagctaacaggctctcacgt
ggatcctcgatgaattcgtcagcaagaagagggcatatggagtttagtcctaggggagga
ggaggaatgctatcacctccaagtgcccaaatgggtggtttccatggaccacctcaaggt
cgtggctttagtaatcaggacattcgatttgatgaaaggccaccttatgaaccaactagg
ctggtttcaatgcctcaaaggtcagtaggtgatgagcctattaccttgggtccgcaaggt
ggtcttggtcagggaatgtctaaaaggcctacagtagtatcaaacacttttcattctgat
gctactcatgccggtggtggagatgctaggcgaacagctggtggtttgaatggttttggc
tcacaaagacctgcaagtcctgttactcacggacggtcaagtcctcaagagcggggaaca
gcttatgtccacagggaatttgcaagtctgtctcgtgcttctgatccgtcaccagaagtt
tcatctgctaggccagtattacaaggcccatcgtctacagtaaacagtcctcgagaaaat
actttgtctgaggaacggttacataatatgtcactgtcagcaattaaggaatattacagt
gcccgagatgagaaggagattggtttgtgcatgaaagatataaattcaccagcttatcac
ccaacaatgatttctctctgggtatctgattcgtttgagagaaaagacaaagaaagggat
cttttagcaaagctccttgttaacctggtgaaatctgctgacaacgccttaaccgaagtc
caactagtgaaagggtttgaatctgttttgaaaaccctggaggatgccgtaaatgatgct
ccaaaagcagcagagtttcttggtagaatatttggtaaaagtgtgactgagaaagtagtg
acattgacagagattggtcggttaatccgagaaggaggagaagaaccaggaagtctaata
gagtttggattaggcggcgatgttcttgggagtgttttggagatgataaaggcagaagct
ggcgaagaagcgttggctgagattcgccggagctcaggtctgaggattgaagatttcaaa
cctcttgcacctagccggtctaagatattagagaaatttacttag
DBGET
integrated database retrieval system
