Capsella rubella (pink shepherd's-purse): 17885069
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Entry
17885069 CDS
T02984
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
17885069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17885069
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
17885069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
17885069
NCBI-ProteinID:
XP_023638771
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MEGRDDGGGKVVGLIEKATKSTAQEVDPRLLKAIKSIVRYSDSEVRIASQTLMELMRDNH
SQVRYLTLFIIDELFMRSKLFRTLIIENLDQLLSLSVGFRSDMPLPTPPAVATMLRSKAV
EFLEKWNLSFGLHYKELRLGFDYLKNTRKLKFPDLQANAARVQRERHEREMKTKEILRNK
FGSLRDSFGLLKHEIDVTIKEIKECMEIVLWRGDDGVPLSILDEEDFEEIRCSHLRQIRL
DSLQQSEKVEETIENRVVFDVLREQCKLLVTKHLISVQEGISLLIRVDVSDNRTRDSMLK
DLIDIRNNILAAQKKWEEAGFTISSMTSTHENEETNEEEDDIWEEDDGKVKTDVFKNVAP
VTICQQSENSSLPSSSDTNRSTSESRSNKASTTKKVGSSGNSLRDKLISEAPVMNWGSQL
SNWDSTAEVRANYRGLELESHWGRVDQDAVIPAEKIAELNLQATVYREERTETPPCRAPL
KKGGFCQRRDLRICPFHGPIVPRDDEGNPIIQESPLDESENQTSSTTEINQDVPIDVTAS
DSDPNQLARQIAKQALRNIREKDKEVMRKRAKVVKVKVKEHNQEVLRDAAIASTSRSNAI
DEEFDRVFAARKNKKQTFSSMRHKKTTAKDRISQRLFSNRVKGGSKPQQLAQGNDEKCRE
TSANQW
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaagggagagatgacggcggaggaaaagttgtggggttgatagagaaagcgacaaaa
tcaactgctcaagaggttgacccgaggctactcaaggccatcaaatctattgttcggtat
tctgattcggaggtccgtatcgcttcgcaaaccctaatggagctcatgagagataaccac
tctcaggttcgatatctgacgctttttataatcgacgaacttttcatgagatcaaagctc
tttagaactctgataattgagaaccttgaccagcttttgagtttaagtgttggttttaga
agcgatatgcctctccctacaccaccggccgttgccactatgttgcgttctaaggctgtt
gagttcttggagaagtggaatttgtcttttgggttacattacaaggagcttaggcttggt
tttgattaccttaagaacacccgcaagttgaagttccctgatttgcaggcaaatgctgca
cgtgtgcaacgagagagacatgagagggagatgaagactaaagagattttacgtaacaag
tttggttctttgagggatagttttggactcttaaagcatgagattgatgtaacgattaag
gagatcaaggagtgcatggaaattgttctgtggagaggggatgatggtgttccgctttcg
atcttagatgaggaagattttgaggagatccgctgttctcatcttaggcaaatccgtctt
gattcattacagcaatcagagaaggttgaagaaactattgaaaacagagttgtatttgat
gtattgagggaacagtgcaagcttctagtgacaaagcatctgatctcggttcaagaaggg
atctctcttctcatcagggttgacgtaagcgataacagaacgagagattccatgcttaaa
gacttaatcgatatcaggaataatattttggcagctcaaaagaaatgggaagaagctggt
tttacaatttcaagtatgactagtactcacgagaatgaagaaactaacgaggaagaagat
gatatctgggaggaggatgatggcaaggttaaaactgatgttttcaagaacgtggctcct
gtgacgatatgtcagcagagcgagaattcgtctttaccatcatcaagtgacacaaatagg
tctacatcagaatctaggtccaacaaagcttcgaccactaaaaaagttggaagcagtgga
aactctcttagggataagctaatttctgaagcgcccgtgatgaattggggatcacagttg
agtaattgggactcaactgcggaagttcgagctaattaccggggtttagagctcgagagc
cactggggcagggtggatcaagatgctgtaattccagcagagaaaatagcagaactgaat
cttcaggctactgtttatagggaagagagaacagagacacctccatgccgtgctcctcta
aagaaaggtggtttttgtcagagaagagatttgcgaatctgtccgtttcacggacccatt
gtaccccgggatgatgaagggaaccccataatccaggaatctccattagatgagagtgaa
aaccaaacttcctcaactacagagatcaaccaggatgtgcctatagatgtaacagcttca
gactctgaccctaatcagttagctaggcaaatagcgaaacaggctctaaggaatataagg
gagaaagacaaagaagtgatgaggaaaagagcaaaggttgttaaggtgaaggttaaagaa
cataatcaagaagttctgcgtgatgctgctatagcctcaacttccagatcaaatgctatc
gatgaagagtttgatagagtttttgctgcaagaaaaaacaagaaacaaaccttttcctcg
atgcggcataagaaaacaactgctaaagatagaatatcccagagactgtttagtaatcgg
gtaaaaggtggttctaaaccacaacagttggctcagggcaatgatgagaagtgccgggaa
acatctgctaaccagtggtaa
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