Capsella rubella (pink shepherd's-purse): 17885099
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Entry
17885099 CDS
T02984
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17885099
04121 Ubiquitin system [BR:
crb04121
]
17885099
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
17885099
Membrane trafficking [BR:
crb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
17885099
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
17885099
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Rad50_zn_hook
zf-C3H2C3
DUF1645
zf-Nse
DpnI
DZR_2
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
17885099
NCBI-ProteinID:
XP_006291489
UniProt:
R0FPE4
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MSSVRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEIDLGPSSPFDMLRAHRDVERDPTF
DLMEAFSAFMRSRLAERNYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNNNS
VEAFVNGAAPGIGITRGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK
ITQKHIKSSDSHCPVCKDEFELKSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRKELPSR
GSSSSTQSNQNRSTSTGRENNRRRNIFSNLWPFRSSSSSSTQNRRDTNNTTTTEEGHYQH
HQQQQQQHQHHQQQSHMGYSGWPFDY
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgttcggaatacccattggtgtcacagatgtcagcgtgctgtttggcttcga
gctcgggatgctgtttgttcatattgtggaggaggatttgttgaggaaatcgatcttgga
ccgagtagcccctttgatatgcttagagctcacagggatgttgagcgtgatccaaccttt
gatctcatggaagctttctctgcttttatgagaagccgcttagctgaaagaaactatgac
cgggagattagcggaagacttggctctgcgggttctgaaagcttttcaaacttagctcct
ctattgatcttcggtggacaagctccctttagattggctggtggagataataataattca
gttgaagcctttgtcaatggcgcagcacctggaattggtatcacgcgtggcaccaatgcc
ggagactactttttcggacctggtcttgaagaactgattgaacagctttcatcgggcact
catcatcgaggcccaccaccagcaccaaaatcatcaattgatgcattgccaaccatcaag
atcacacagaagcatatcaagtcatcagactctcactgcccggtttgcaaggacgagttt
gaactgaaatcagaagcaaaacagatgccgtgtaaccatatctatcattctgactgcatt
gtcccgtggctggttcagcataactcatgcccagtctgtcgtaaagagttaccatcaaga
ggatcttcttcaagcacacagagtaatcagaacagaagcaccagtactggaagagaaaac
aacaggagaaggaatatcttctctaacctctggccattccgctcgtctagctcaagctcg
actcaaaaccgtagagacacaaacaacacaacgactacagaagaagggcactatcaacat
caccagcagcaacagcaacaacatcaacatcatcagcaacaatcacatatgggttacagt
ggatggccttttgactactaa
DBGET
integrated database retrieval system
