Capsella rubella (pink shepherd's-purse): 17885273
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Entry
17885273 CDS
T02984
Name
(RefSeq) RAB6A-GEF complex partner protein 1 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17885273
Membrane trafficking [BR:
crb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
17885273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
WDR55
Beta-prop_RSE1_2nd
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
17885273
NCBI-ProteinID:
XP_023638204
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MYMAYGWPQVIPLLAGSCPSSQRAVYLKLAGRLLLVVSSSHLELWGSSQQRVRLGKYMRD
EKSVREEGENLQAVWSPDSKLIAVLTSSFFLHIYKIKFTDKQIKPGERQPSELCFATISL
LLSEQVPFAGKDLSVSNFVTDSKTMLLGLSDGCLYSISWKGEFGGAFSIGFHPSDCNNDR
LLSYTLGNGLVSGVASATLAYDDEFSTKSAIIQLELCTHSKLLFVLNSDGQLVVCSVNKK
GLKYTESIKAEKKLGGDVVCASVASEQQILAVGTRKGMVELYDLSQSISLLRTVSLHDWG
YSAEYTGPVSNIAWTPDNSAFAVGWKLRGLAVWSVSGCRLMSTVRQIGLSSTSSPKINPK
QDCKYEPLMNGTSAIQWDEYGYRLFATEEASCDRILAFSFGKCCLNIGVSGKTYVRQVMY
GDDRLLMVQAEDTDELKLLHLKLPVSYITQNWPVQHVAASEDGKDLAVAGLHGLTLYNVM
YKRWRVFGDVSQEQQIHCKGLLWLGKKIVVICNYIEASETYELLFYPKYHLDQSSLLCRK
VLLGKPMVMDVYQDYILVSYLPFIIHVYHAKIYGELTPSSKADLQLSTVRELSIMTAKSH
PAAMRFVPDQHPRESELDNGNFSSDLPNREPSRCLILRGNGELSLLDLVDGRERELTDSV
ELFWVTCGQSEEKTNLVEEVSWLDYGHRGMQVWYPSLGEDPFMQEDFLQLDPELEFDREV
YPLGLLPNVGVVVGVSQRMSFSASAEFPCFEPTPQAQTILHCLLRHLLQRDKNEEALLLA
QLSAEKPHFSHCLEWLLFTVFDAEISRPNPNRNQISGPVHLKKLSLLRKACDLIKNFPEY
YDVVVNVARKTDARHWADLFSAAGISTTLFEDCFQRRWYRTAACYILVIAKLEGVAVSQY
CALRLLQATLDESLYDLAGELVRFLLRSGRDIEQAPTETDSLSPKLLGFLIFGSSHKKSS
LDKSSSFKEQSPHVASVKSILESHASYLMSGKELSKLVAFVKGTQFDIVDFLQRERYGCA
QLQNFAAGLELIGEKLQMSELQNRLDAEFLLAQMCSVKFKEWIVVLATLLQRSEVLYDIF
RYDLRLWKAYSMTLQSHLGFAQYHDLLQILEDKLSANAGEESNRGSIS
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcttacggatggccgcaggtgatcccgcttctagcgggatcgtgcccgtct
tcgcagcgagccgtgtaccttaagctcgcaggtcggctattgctggttgtttcttcgtca
catttggagctttggggatcttctcagcaacgagtgaggctgggaaagtatatgagagat
gagaagtcggtgcgagaagaaggggagaatttgcaagctgtgtggagtccagactccaaa
ctgattgctgttcttacatcatcattcttcctccatatatataaaataaaatttacggat
aaacaaattaaacccggtgagagacaaccctcggagttgtgttttgcaaccatatctctt
ttgctaagtgagcaggtcccttttgctgggaaggacttgtctgtgagtaattttgtgacg
gacagcaaaactatgcttttgggactctctgatggatgtttatatagtatatcctggaaa
ggagagttcggtggagctttcagtattggcttccatccttctgattgcaacaatgataga
ctcttgtcctacactcttggtaatgggctagtttctggagtagcttcagcaacacttgca
tatgatgatgaattctccacaaaatcggctatcattcagctggaactctgcactcattcg
aaattattgtttgtgttaaattctgatgggcagctagtagtatgctctgtgaataagaaa
ggtttaaagtacactgagagcattaaagctgagaagaagttgggtggtgatgttgtttgt
gcatcagtggcttcagagcaacaaattcttgctgtgggtacaagaaaagggatggtggaa
ttatatgatctgtcacaatcaatctctctcttacgaacagtttctttgcatgactggggt
tattcagcggagtacactgggcctgtcagtaacattgcatggacgcctgataattctgca
tttgcagttgggtggaagttgagaggacttgcagtttggtcggtttctggatgtagattg
atgtcaactgtccgtcaaattggactgagttctacatcttcccctaaaattaatccaaaa
caagactgtaaatatgaaccactgatgaatggtacttcagccatccagtgggatgaatat
ggatatagactatttgctacagaggaggcatcatgtgatagaattcttgcattttccttt
ggaaaatgttgcttaaatataggagtttcaggaaaaacttatgttcgtcaggtaatgtat
ggtgatgatagactactcatggttcaggcggaggacactgacgagcttaagcttttacat
ctaaaacttccagtttcttatattacccaaaattggcctgttcaacacgtggcagctagc
gaggatgggaaagacttggcggttgctggtttacatggcctgactttgtataatgttatg
tataagaggtggagggtatttggagatgtcagtcaagaacaacagattcattgcaagggt
ttgctatggctgggaaagaagattgtcgtaatctgtaactacatcgaagcttctgagaca
tatgaactgcttttctatccaaaatatcaccttgatcagagctctttactttgtcgtaaa
gttctgcttggcaaaccaatggtgatggatgtttaccaggattatatactcgtatcttat
ctcccgtttatcatccacgtctatcatgcgaagatatatggtgaattgacaccttcaagc
aaagcagatctacagctttccacagtaagagagttgtccatcatgactgcaaagagccat
ccagcagcaatgcgatttgttcctgaccagcatcctagagaatccgagttggataatggc
aatttttcttctgacttgccaaatagggaaccctcaagatgtcttatactgagaggaaat
ggggagctttcacttcttgatttggttgatggacgagagagggaacttacagactcagtt
gaactattttgggtgacatgtgggcaatcggaggagaagacaaatcttgtcgaggaagta
tcttggctagattatgggcaccgaggaatgcaggtttggtatccttctctaggggaagac
ccttttatgcaagaggatttcctgcagttggatccagagttggaatttgatcgcgaggtt
tatcccctgggacttttaccaaacgtgggtgtcgttgttggagtttctcagaggatgtca
ttttcggcaagcgcagagtttccatgttttgagcctacaccccaggctcagacaatacta
cattgcctgctccgccacctccttcagagagacaaaaatgaagaggcgttactgttagca
caattatcagcagagaaacctcacttctcgcattgtctggagtggcttctttttactgtt
tttgatgcagagatttctaggccaaatccaaacaggaaccagatttcaggacctgtacat
cttaaaaagctatctcttttgagaaaagcctgtgatttaataaaaaatttcccggagtac
tatgatgtggtagtgaatgtagccagaaaaaccgatgctcgtcactgggctgatttattt
tccgctgctgggatatcaacaacgttgtttgaagactgcttccagcgaagatggtatcga
accgcagcgtgctatatacttgtgattgccaaactggaaggtgttgctgtcagtcagtac
tgtgcattacggctattgcaggcgacacttgatgagtccctctatgatcttgctggagag
ctggtgaggttcttactaagatctggaagagacattgagcaggcgccaacagaaacagat
tcattatcacctaagcttctcgggtttcttatttttggttccagccacaagaaatcatca
ctcgataagagctcctcgttcaaagagcaaagtcctcatgttgcttctgtaaagagcata
cttgaaagtcatgccagttacttgatgtctggtaaagaactttcaaagcttgttgcattt
gtcaaaggcacccagtttgatattgtggattttcttcaacgagaaagatatggttgtgcg
cagctgcagaatttcgctgcaggacttgagctgattggagaaaagctgcaaatgagtgag
ctacagaaccggttagatgcggagtttctattggctcagatgtgttctgtcaagtttaaa
gaatggatagttgttcttgccactctattacaacggtccgaggttctttatgatatattc
cggtatgatctacggttgtggaaagcatatagcatgacattacagtctcacttgggtttc
gctcagtaccatgacttacttcagattttagaggataaactctcagcgaacgcaggagaa
gaaagcaatagaggttccatctcttga
DBGET
integrated database retrieval system
