Capsella rubella (pink shepherd's-purse): 17885364
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Entry
17885364 CDS
T02984
Name
(RefSeq) alpha-mannosidase At3g26720
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
17885364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17885364
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
17885364
Membrane trafficking [BR:
crb04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
17885364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
17885364
NCBI-ProteinID:
XP_006290539
UniProt:
R0FLV6
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MAVKCFSLYLILAAIVIGGVNSEYIEYNTKPRIVPEKINVHLVPHSHDDVGWLKTVDQYY
VGSNNSIRGACVQNVLDSVIASLLDDENRKFIYVEMAFFERWWRQQSKAKKVKVKKLVDS
GQLEFINGGMCMHDEATPHYIDMIDQTTLGHQFIKAEFGQVPRVGWQIDPFGHSAVQAYL
LGAEFGFDSLFFARIDYQDRAKRLRDKTLEVIWQGSKSLGSSSQIFTGVFPRHYDPPDGF
TFEINDVSAPVQDDPLLFDYNVQERVNDFVAAALAQVNVTRTNHIMWLMGTDFRYQYAYS
WFRQMDKFIHYVNKDGRLNVLYSTPSIYTDAKYAANESWPLKTDDFFPYADKPNAYWTGY
FTSRPAFKKYVRDLSGYYLAARQLEFFRGRNSSGPTTDMLADALAIAQHHDAVSGTQRQH
VAADYALRLSMGYLQAEKLVASSLFFLSAAKSSTEEKNPGTKFQQCPLLNISYCPASEAR
LSSGKSLVVVAYNSLGWKREEIVRVPVSSKNVIVKDASGKEVVSQLLPLSDITLRIRNEY
VKAYLGRSPRDTAKHVLAFTASVPPLGFSSYVISDTGRTARGPPASDVTSGNINQNVEVG
QGNLKLLYSEEGVKMTRHLSTRNQVTAEQSYAYYIGSNGTDKDPQASGAYVFRPDGVVPV
KSEGEAQLTVVRGPLFDEVHQDFNSWISQITRVYKEKNHAEIEFTVGPIPADGISKEVIT
KLTTTMKTNGTFYTDSNGRDFIKRVRDFRTDWDLQVYQPVSGNYYPINLGIYMQDKTSEL
SVLVDRAVGGSSLENGQIELMLHRRMQHDDIRGVGEILNETVCLPEGCKGLTIRGKLYVQ
IDKPGDGSKWRRTFGQEIYSPLLLAFTEQEGDSWINSHKTTFSAFEPSYSLPKNVALLTL
QELENGEVLLRLAHLFEVGEDSEYSVMAKVELKKLFHNKKISQVKETSLSGNQEKAEMEK
RRLIWKVEGSAGKEVIRGGLVDAEKLVVELVPMEIRTFLIKFDDHIEMVGERKQQLT
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaaatgtttctctctttatctgattttagcggcgattgtaatcggcggcgtg
aactccgagtacatagagtacaacacaaaaccgagaatcgtacctgaaaaaatcaatgtt
cacttggttcctcactcacacgacgacgttggttggcttaagaccgttgatcagtactac
gttggttctaataactctattaggggagcttgtgtacagaatgtattggattctgtaatc
gcttcgttgcttgatgatgaaaatagaaagtttatatatgttgagatggcgttttttgaa
agatggtggaggcaacaaagcaaagctaaaaaagttaaagtcaagaagcttgttgactct
ggtcaacttgagttcataaatggtggaatgtgtatgcatgatgaggcgactccacattat
attgacatgattgatcagactacattaggccatcagtttattaaagctgagtttggtcag
gtccctagagttggttggcagattgatccttttggacattctgcagtgcaagcttacttg
cttggggcagagtttggctttgactcactgtttttcgctagaattgattaccaagatcgt
gcaaagagattacgagacaagactcttgaggttatttggcaaggatctaagtcccttggc
tcatcttcacagatattcaccggtgtattccctagacattacgatcctcctgatggtttc
acatttgaaataaacgatgtatcagctcctgtccaggatgatcctctcctttttgattac
aatgttcaagagcgagtcaacgactttgtagctgcagcccttgcacaggtcaacgtaacc
aggacaaaccatatcatgtggttaatgggaactgacttccgttaccagtatgcatattca
tggttcagacagatggacaagtttattcactatgttaacaaggacgggcgtctcaatgtt
ctgtattcaacaccgtctatctacaccgatgcaaaatatgctgcaaatgagtcttggccc
ctaaagactgatgatttcttcccgtatgcggacaaacctaatgcatactggacagggtac
tttacgagcaggccagcctttaagaaatacgtgagggatttaagtggttactatctggcg
gctcgacaattggaattctttagaggtaggaatagttcaggaccaacaaccgatatgcta
gccgatgctttggcaattgctcaacaccatgatgcagttagtggtacacaaagacaacat
gtggctgcagattatgctcttagactctcaatgggttacctgcaggctgagaagttggtt
gcctcctcccttttctttttatcagcagcaaaatcaagtactgaagagaagaatcctggc
acaaaatttcagcagtgtcccctacttaatatcagttactgtcctgcatctgaagctcgt
ctgtccagtgggaaaagcctggtggttgttgcttacaattctcttggatggaaacgagag
gaaattgttcgtgttcctgtgtcatctaaaaatgttattgtgaaagatgcatctgggaaa
gaagttgtgtctcagcttctacctctttcagacattacgctgagaataagaaatgagtat
gtcaaagcgtatctaggaagatcaccaagggatactgctaaacatgtgcttgcatttaca
gcttcagtaccacctcttgggttcagctcgtatgtcatctcagacactggacgaacagcg
cgtggaccacctgcgtcagatgttacttctggaaacataaatcagaatgtagaagttggc
caaggaaatctgaagttactttattcagaagagggagtgaaaatgactcgtcatttaagt
acaagaaatcaggttactgctgaacaatcatatgcttattacataggaagcaatggaact
gacaaggatccacaggcttctggagcatatgtttttcgaccagatggtgtggttccagtt
aaatccgaaggagaggctcaactgactgttgttcgggggcctttgtttgatgaagtgcat
caggactttaactcctggatatcacagattaccagagtgtacaaggaaaaaaaccatgct
gaaattgagttcactgttgggcctataccagcggatggtattagcaaggaagttatcact
aaactgacaaccaccatgaaaacaaatggaacattttacacagactctaatggacgtgat
ttcatcaaacgggttcgggacttccgaacagattgggacttgcaagtgtaccaaccggtt
tctggaaactattatcctataaaccttggaatatatatgcaagataaaacctcagagtta
tcggtgttggtggatcgtgctgtaggcgggtccagcttagagaacggccagattgaattg
atgcttcatcggagaatgcagcatgatgacattagaggtgttggcgagattcttaatgaa
acagtctgtcttcctgaaggatgcaaaggattaacaatacgagggaagctttatgtacag
atagataaacctggagatgggtcaaaatggcgtcgaacatttggtcaagaaatttattct
ccactacttctagcattcacagaacaggaaggagatagttggattaattcacataagaca
actttctcagcatttgaaccgtcatattcattaccaaaaaacgtcgcattactcacgctc
caggagttggaaaatggggaagttcttttaaggcttgcgcacttatttgaggttggagag
gatagtgagtactcagttatggcaaaagtggagctgaagaaactatttcacaacaaaaag
ataagccaagtgaaagagacaagtctttcaggaaaccaagagaaggcggagatggagaag
agaaggctaatctggaaagtagaaggctcggccgggaaagaagtgataaggggaggactt
gtggacgcagagaagctagtggttgagctagttccgatggaaatccgaaccttcttgatc
aagtttgatgatcacattgaaatggttggtgaaagaaaacagcaacttacatag
DBGET
integrated database retrieval system
