Capsella rubella (pink shepherd's-purse): 17885495
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Entry
17885495 CDS
T02984
Name
(RefSeq) polygalacturonase ADPG1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17885495
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
17885495
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Paralog
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
17885495
NCBI-ProteinID:
XP_006292816
UniProt:
R0H8N7
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MGRCYRGVLTLFFTVLLMLSLCQAFSSNVVDDGYGHEDGSFESDSLLKLNNDDVLTLKSS
GETTSESSTVSVSNFGAKGDGKTDDTQAFEKAWKKACSTKGVTNFLVPKGKSYLLTSTQF
RGPCKSLRNFQILGTLSASTKRSDYKDKYHWLIIEDVNNLSIDGGSTGIINGNGKIWWQN
SCKIDKSKPCTTAPTALTLYKLNNLNVKNLRVRDAQQIQVSIENCNNVDVKNVAITAPGD
SPNTDGIHITSTKNIRVSKSDIGTGDDCISIEDGTQNLQISDLTCGPGHGISIGSLGDDN
SKAYVSGIYVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIQMKNVKNPIIIDQNYCDK
AKCEEQDSAVQVKNVVYKNISGTSATNVAITLNCSEKYPCQGIVLENVNIKGGKASCKNA
NVKNQGTVSPKCS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggccgttgttatcgcggagtgcttactcttttcttcaccgttcttttgatgctctcg
ctgtgccaagcttttagtagtaacgttgttgatgatggatatggtcacgaagatggaagc
tttgaatccgacagcttactcaagctcaacaacgacgatgttcttaccttgaaaagctcc
ggtgaaaccacttcagaatcctcaactgttagcgtttccaatttcggagccaaaggagat
ggaaaaaccgatgatactcaggcctttgagaaagcatggaagaaagcatgttcaacaaag
ggagttaccaatttcttggtgcctaaaggaaagagttacctccttacgtctactcaattt
agaggcccgtgcaaatcgttgcgtaactttcagatcttaggcactctatcagcatctaca
aaacgatcggattacaaagacaaataccattggcttatcatagaggacgttaacaatcta
tcaatcgatggcgggtcgactgggattattaacggcaacggaaaaatctggtggcaaaac
tcatgcaaaattgataaatctaaaccatgcacaacagcgccaacggctcttactttatac
aagttaaataatctaaatgtgaagaacttgagggtgagagatgcgcagcagattcaagtt
tcgattgagaactgcaacaatgttgacgttaagaatgttgccatcaccgctcctggcgat
agtccaaacaccgatggaatccatatcaccagtaccaaaaatattcgagtctccaaatca
gatattggaacgggtgatgattgtatatccattgaggatggaacacaaaatcttcaaatc
agtgatttaacttgcggcccaggtcacggaatcagtattgggagcttgggggacgacaac
tcaaaagcttatgtctcaggaatttatgtggatggtgctaagttctctgagagtgataac
ggagttcggattaagacttatcagggaggatcaggaactgccaagaacataaagtttcaa
aacattcaaatgaaaaatgtcaagaatccgatcataatcgaccagaactactgcgacaag
gccaaatgcgaagaacaagactccgccgtgcaagtgaaaaacgtggtgtacaagaacata
tccggtacgagcgcgacgaatgtggcgataactttgaactgtagtgagaagtatccatgc
caagggattgtgcttgagaacgtgaacattaaaggaggaaaggcttcttgcaaaaatgcc
aacgtcaaaaatcaaggcaccgtttctcctaaatgctcttaa
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