Capsella rubella (pink shepherd's-purse): 17885671
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Entry
17885671 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC17885671
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17885671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crb03036
]
17885671
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
17885671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
17885671
NCBI-ProteinID:
XP_006290504
UniProt:
R0FLS0
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Position
Unknown
AA seq
1309 aa
AA seq
DB search
MAIEKSNVKLSRFDLEYSHGSGESMSSYEEQRKNSVANNVDSEDEDDDFDEDDSGAGSDD
FDLLELAETGAEFCQVGNVTCSIPFELYDLSSLEDILSVDVWNECLTEEERFSLSSYLPD
MDQLTFMRTLKELFEGRNFHFGSPIKKLFDMLKGGQCEPRNTLYLEGRNLFLRTKHYHTL
RKYHNDMVVNLCQTRDAWVSCKGCSIDEKLRVLNILKSQKTLLREQKEDFKEDSTEKEEL
FDGPWSRKEKDRKSTKKKLSRRSGYGVDSGLEFPSRRQSMPGEQDRYGKPKSKLKFPFAK
TSVGPHASGYNGLSMNSAYNHSSLARKKYSSGLVLGSEDNIDDDDHDPLFGMGSRRNRDI
VAREKSVYSRPGKKHRFSRDGEPISELFMGPPYSSRQSHSNYAKLSKYANNSQPRAFADQ
MKPVKGSLADLRGDLYRHGKNYGDGFSDPRYISDDLNSKSKKLKSERGSPDTSLRSYRAS
MQQMNERFLNSDFGENQVQEKIRVNVVPNARSGIAAFRDSRMFMENDDTESDSSQGYDDE
EERNRFMRNKSSVSVEGLNNSRFPMLKSRQDTKKNKSRKNDMQDHQLLDGRGAYLKYLGA
PGEHIYVAGTEKHSFKAKQKGKMRDRSPLNHFSSRDFEDGFVTSFSELEDRNNRKEFFRA
NKNSQTREQMIDRQLFQRPSAKLNLSGRKRGFDEDDELFEMRTLVNDNARGRLSRKYEVS
EGDGNSCDENLDARLLVTCSAVSKKRKTRESLMDMERKEDNGDLQLYSDIQQPVDDVIVS
KRKGKKKIEVDIVDLEISDIPKESEAEVETKPQKKPFVLITPTVHTGFSFSIVHLLSAVR
IAMTSLRPEDSLDISKPMAVETAEHETGENGAPVPKETEDDKSPQQENGNLPSLTIQEIV
SCVKSNPGDPCILETQEPLQDLIRGVLKIFSSKTSPLGAKGWKPLVTYEKSTKCWSWIGP
VLRPSDQEAVEEVTSPEAWGLPHKMLVKLVDSFANWLKNGQETLQQIGSLPEPPLSLMQC
NLDEKERFKDLRAQKSLSTITQSSEEARAYFRKEEFLRYSIPDRAFVYTAADGRKSIVAP
LRRGGGKPTSKARDHFMLKRERPPHVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYIV
EDVSDSQVNQVVSGALDRLHYERDPCVQFDSERKLWVYLHRDREEEDFEDDGTSSTKKWK
RPKKEAAEQTEEQEAATEAFNGNEEQTEIEMGAEPKIAEPTGLDGDQSAANQLCNETEQA
AEEQDDENNAQGNEPMWEPDPAVVFNPVEDNTFICQENSANDDFDDEET
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgagaagagtaacgtcaagctttcgaggtttgatctagagtactctcatggt
agtggtgaatctatgtcaagttacgaagaacagcgtaaaaactcagtggctaataatgtt
gattctgaggatgaagatgatgattttgacgaagatgattctggagcaggttctgatgat
tttgatttgcttgaattggcggaaactggtgctgagttttgtcaagttgggaacgtgact
tgtagtattccttttgagttgtatgatctctctagtttggaagatatactctctgttgat
gtttggaatgagtgtctcactgaggaagagaggtttagtctctcgagttatctgcctgat
atggatcagctcacgtttatgcgtactttgaaagagcttttcgagggtcgtaatttccac
tttggcagtcctattaagaaactgtttgatatgttgaagggtgggcagtgtgaaccgagg
aataccctttatcttgagggacgtaatttgtttctacgaaccaaacattatcatactttg
agaaagtatcataatgacatggtggtgaatctttgtcagacaagggatgcttgggtaagt
tgtaaagggtgcagtattgatgagaagctccgtgtcctgaatattttaaagagccaaaag
actctgctgcgtgagcaaaaggaggattttaaggaggattcaacagagaaagaagaactt
tttgatgggccttggagcagaaaggaaaaagataggaagtctacaaaaaagaaattgtcc
cgtcgttctggttatggtgttgattcaggtttggaatttcctagccggcggcagtcgatg
cctggagaacaggatagatatggaaaaccaaaatcgaaactgaagtttccttttgctaaa
acgtctgttgggccacatgcttcaggttataatgggttaagtatgaattctgcgtataac
cactcttctctagctagaaagaagtatagttcaggtttggttcttggatcagaagataat
attgatgatgatgatcatgatccactctttgggatgggttctcgaagaaaccgggatatt
gttgccagagagaaatctgtatactcaaggcctggaaagaaacatagattttcaagagac
ggagaaccaatttctgaactttttatgggtccaccatattcatcaaggcagtcccacagt
aactacgcaaaattgagtaaatatgcaaataatagtcagcctcgtgcatttgccgaccag
atgaaacctgtaaaaggtagtctagcagaccttcgtggtgacttatatcgccatgggaag
aactatggagatggcttttccgatcccagatatatatctgatgacttgaatagtaaaagc
aaaaaattgaagtctgagaggggctctcctgatactagtttgagatcttatagagcttct
atgcaacaaatgaacgagaggttcttaaattctgattttggtgagaaccaagtgcaggaa
aagattagggtgaatgtggtaccaaatgcgaggtctggtattgcggcattcagagatagc
agaatgttcatggaaaatgatgatacagaatcagattcgtcccagggttatgatgatgag
gaggagagaaatcgctttatgcggaacaaatcatccgtctcagtagaagggctgaataat
tctcgttttccaatgctcaaatccaggcaagatactaaaaagaacaaatccagaaagaat
gatatgcaggatcatcaattgcttgatggacggggagcttacttgaaatatttaggtgca
cctggggaacacatctatgtggcagggacagagaagcattccttcaaggcaaaacagaag
ggtaagatgcgtgacaggagtcctttaaatcacttctcttctcgagattttgaagatggc
tttgtcacaagctttagtgagttggaggacagaaacaacaggaaggagtttttcagggca
aacaagaatagtcagacaagagagcaaatgattgatagacaactgtttcagagaccatct
gcaaaactaaatttgtctgggagaaaaagaggctttgacgaagatgacgaattatttgag
atgagaacattggttaatgataatgcccggggtcgacttagtaggaaatatgaggtttct
gagggtgatggcaatagttgtgatgaaaacttagatgccaggctgttggttacttgcagt
gctgtgtcgaaaaagaggaagactagagagtctttgatggacatggagaggaaggaggat
aatggtgatctgcagctatattccgacattcaacagccggttgatgatgtaattgtctca
aagagaaaaggaaagaagaaaatagaggttgatattgttgatctggaaatctctgacata
ccaaaagaaagtgaagcagaggtggaaactaagccgcagaagaagccatttgtgttgatc
acaccaacagttcacactggcttctctttctctattgtacatcttctctcggcagtgcgt
atagcaatgacaagtttgcgtcctgaagattcattagatattagcaaacctatggcagtg
gagaccgcagaacatgaaacaggagaaaatggtgctcccgtgcccaaggagacagaggat
gacaagtcgccacagcaagaaaatgggaacttgccatccctcactatccaggagattgtt
agctgtgtgaagtcaaacccgggagatccttgtatccttgagacacaagaaccgcttcag
gatttgattagaggggttctgaaaatcttctcctcaaaaacgtcccctttaggggcaaag
ggttggaagccacttgtaacatatgagaagtccacgaaatgctggtcttggattggccct
gttctccgtccttctgatcaagaggctgttgaagaggtaacatcgcctgaagcctggggt
cttccgcacaagatgcttgtcaagttggttgattcatttgcaaattggctgaaaaatggc
caagaaactcttcagcaaataggaagtcttcctgaaccaccgctgtcactcatgcagtgt
aatcttgacgagaaagaaaggtttaaagatctgagagcccaaaagagccttagcacaatc
acccagagttccgaagaagcaagagcttatttccgcaaagaggaatttctgagatactca
attccagacagagcctttgtgtacacagctgctgatggtagaaagtcgattgttgctcct
ctgagaagaggcggagggaagccaacctcgaaagctcgggatcatttcatgttgaaacgt
gagagaccaccacatgtcacaattttatgtctggtgagagatgctgccgccagattgcct
ggtagtattgggacaagagctgatgtttgtaccttaataagagactcgcagtatatcgtg
gaggatgtgtctgattcacaagtgaatcaagtagtgagtggggccttggatcgtttgcac
tatgagcgggacccttgtgtccaattcgattcagagaggaaactgtgggtgtatttacac
agagacagagaagaagaagatttcgaggatgatggtacttcatccacaaagaaatggaag
agaccaaagaaggaagctgcagagcaaacagaggaacaagaagccgccactgaagctttc
aatgggaatgaagaacaaaccgaaattgagatgggtgcagagcctaagattgctgagccc
actggtttggacggggatcagagtgcagcaaaccaactatgtaatgagactgaacaagct
gcagaggagcaagatgatgagaacaacgctcaaggtaatgagccaatgtgggagcctgat
cctgctgttgtttttaatcctgttgaggataacacattcatctgccaagagaactcagcg
aatgatgatttcgatgatgaggaaacatga
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