Capsella rubella (pink shepherd's-purse): 17885725
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Entry
17885725 CDS
T02984
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
17885725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17885725
04147 Exosome [BR:
crb04147
]
17885725
04090 CD molecules [BR:
crb04090
]
17885725
Enzymes [BR:
crb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
17885725
Transporters [BR:
crb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
17885725
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17885725
CD molecules [BR:
crb04090
]
Proteins
17885725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA
AAA_22
AAA_16
AAA_18
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_15
PRK
AAA_28
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
17885725
NCBI-ProteinID:
XP_023638828
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MRSREKTESKSSKSSSTTHVMFRFADWIDIVLMVLGTVGAIGDGMSTNVSLVFASKIMNT
LGYGQHNPNSTTFKDEIQKCSLYFVYLGLAVLGVAFMEGYCWSKTSERQVVKIRRTYLEA
VLRQEVSFFDSDASTSEIIHTISTDTSLIQQLLSEKVPIFLMHISVFITGLVFSAYFSWR
LTIVALPTLVLLLIPGLIYGNYLVHLTKKSFREDVIANSIVEQALSSIKTILSFTAETQI
IKKYSKVLERHKKLGLKKGLAKGLAVGSSGISFTIWAFLAWYGSRLVMHKQETGGRIYAA
GISFILSGISLGTALTEIRYFSEASVAAARICSRIDRISEIDGEDTTKGFIPKDKMKGRV
EFECVTFIYPSRPKSVVLKNFTLTADVGETVALMGTSGSGKSTVISLLQRFYDPCEGFVR
IDGFDIKMLQLKWMREHIGVVSQDHALFGTSIRENIMFGKDNASMDEIILAAKAANAHGF
ITQLPNGYDTHVGDRGALLSGGQKQRIAIARAIIRNPVILLLDEATSALDGESETLIQNA
LDQVAAGRTTLVVAHKLSTVRGANIIAMLENGFVKELGSHEDLVMKNNHYAKLVKLQTEF
SHEHRQDLSDGIKTPEIRQYWATRNSINRQSIRSSPDLVVSPRSLESIHTTKIDDNSPNT
SFTRLIPLVSLEWKSSLVGCISAATFGAIQPVYALTIGGMISAFFAKNSQEMQDKIRIYS
LIFTSLTVLSISLNLLQHYSFAKMGETLMQRLRVKMLEKIFTFEPAWFDVEENFSGELSS
RLSNEASIVKSIVADRISLLVQTISGVTIAMIIGLLVSWKLALVMIAVQPLSILCFYTKK
VLLSNISHNYAYAQNRSSQIASEAIYNHKIVTSLGSTKKIIEIFDKAQYGAKRKGKNATW
LAGFGMGLAQCLTFLTWALDFWYGGVLVQKGEISAGDVFKTFFVLVSTGKVIAEAGSMTS
DLAKGSAAISSVFKILDRISSQENTNPGEKFETILGGIELKDIEFSYSNRPTIPVLRQFS
LNIKPGTSIGLVGTSGCGKSTVIALIQRFYDVEIGCVKIDGVELRNIDIKWYRQHTALVS
QEPVVYSGSIRENIILGRPEATADEVVGAAKAANTHDFISAMEKGYETECGERGMQLSGG
QKQRIAIARAFLRNPIILLLDEVTSSLDSKSEHEVQDALARIMASRKMTTVVVAHRINTL
NNLDCIAVIADGTVVETGSYDRLKNSRGQFSKLFHAHDLES
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgagatctcgagagaaaaccgagtcgaaatcatctaaatcgagtagtaccacacatgta
atgtttcggtttgcagattggatagatatagttctgatggtacttggtactgtgggagct
attggagatggaatgtctacgaacgtgtcgttagtgtttgcaagcaagataatgaatacc
ttgggctatggtcaacacaatcctaattccacaactttcaaggatgagattcaaaagtgc
agtctctactttgtatacctgggattggcagtactgggagtggcatttatggagggttac
tgttggagtaaaacaagcgagagacaagttgtaaagattcgtcgaacatatcttgaagct
gttcttcgacaagaagtttcgttctttgattcggatgcttccacttctgaaatcatccac
accatttcaactgatacttctctcatccaacaacttctaagtgaaaaggttcccatattc
ttgatgcacatatcagttttcatcactggccttgtgttttcggcatacttttcgtggaga
ttaaccatcgtggccctcccaacacttgttcttcttttaatcccagggttgatctatggc
aattatcttgttcatttaaccaagaaatctttcagagaagacgtgattgcaaactccatt
gtagaacaggctctaagctccatcaagaccattctttccttcaccgcggagactcaaatt
atcaaaaaatactcaaaggtcttggaaagacacaagaagcttgggttaaagaaaggtctt
gccaaaggtttagctgtgggaagctcagggatttcattcaccatttgggcttttcttgcg
tggtacggaagccgattagtgatgcacaaacaagaaaccggtggccgcatttatgcagct
ggaatctcctttatcttgagtggcatctctttagggacggcactgactgaaataagatat
ttttcggaggcttcagttgcggcggctcgaatatgttcaaggattgataggatttctgag
atagatggtgaggatacaacaaaaggattcataccaaaagataaaatgaagggaagagtt
gagtttgagtgtgtaacattcatatatccttctcgtccaaaatccgtagttctaaagaac
ttcactctcacagctgatgttggagaaacagttgctctaatgggaactagtggaagtggt
aaatcgacagtgatttcattattgcaacggttttatgatccatgtgaggggtttgtgaga
atcgatgggtttgacataaagatgcttcagttaaaatggatgagagaacacattggtgtt
gtgagtcaagatcatgctttatttggaacgtcgataagggaaaatataatgtttgggaaa
gataatgcatcaatggatgaaattattttagctgcaaaggctgcaaatgctcatgggttt
ataacacaattaccaaatggttatgatacacatgtaggtgatcgcggggcacttttatcg
ggaggtcagaaacaacgaattgcaattgcgcgtgcaattattagaaatccggtgatttta
cttttagatgaagcaacaagtgcattagatggagaatctgaaacattgattcaaaatgca
cttgatcaagtagctgcagggagaactacactggtggtggcacataagctttcaactgtt
agaggagcgaatattattgccatgttagaaaatggtttcgttaaagaacttggttctcat
gaagatttggtgatgaagaacaaccactatgcgaaactcgtaaaactgcaaacagaattc
agccatgaacatcgacaagatcttagcgatgggatcaaaactcctgagatacgacaatat
tgggctactaggaacagtatcaacaggcaaagcataaggtcatctcctgatcttgttgtg
tctcctagatcattggagagcattcacacaaccaaaatcgatgataatagcccaaatact
tcattcactagacttattcctttggtttctcttgagtggaagtcttctctcgttggttgc
atatcagctgcaacatttggtgcaatccagccggtttacgccttaaccattggcggcatg
atctcagctttttttgcaaaaaactcgcaagaaatgcaggataagatacgcatttactcc
ttaattttcacttccctcactgttctctccatctcccttaatctccttcagcattatagt
tttgcgaaaatgggtgaaacgctaatgcaaagacttcgggtgaaaatgctcgaaaagata
tttacctttgaacctgcttggtttgatgtggaagagaacttcagtggtgagctttcttca
aggcttagcaatgaagcatccattgtgaagtccatagtagcagatagaatttccttgctt
gtccagaccatttcaggtgtgacaattgctatgattataggtttactagtttcttggaaa
ctcgcgttggtcatgatcgctgttcaacctctctctatcctctgcttctacactaaaaaa
gttttgctctccaacatttcccataattatgcctatgcacaaaaccgtagctcacagatt
gcatcagaagctatatacaaccacaagattgtaacatccttagggtccacgaagaagata
atagaaatatttgataaggctcaatatggggcaaaaagaaagggtaagaacgcaacatgg
cttgcgggctttgggatggggttggcgcagtgcctaaccttcttgacatgggcactagac
ttttggtatggaggagtgttggttcaaaagggtgaaatctcagccggggatgtattcaag
acgttctttgttttagtaagcaccggaaaggttattgcggaagcaggaagcatgacttct
gatcttgccaaaggctctgccgccatttcttctgttttcaagatccttgaccgtatttca
tctcaagaaaatacaaaccctggagaaaaatttgagacaatactagggggaatagaacta
aaagatattgagttctcatactctaaccggcctactattccggtgcttcgacaattttcc
ttgaacatcaagcctggaacaagcattggattggttggtacatcaggatgtggtaaatca
acagtgatagctttgatccaacgattctatgatgtggaaataggatgtgtgaaaatagat
ggtgtggaattgagaaatatagatattaaatggtatagacaacatactgctctagtgagc
caagagccagttgtttactctggaagtatccgagaaaatattatactaggacgacccgaa
gcgaccgcggatgaggtggtaggggctgctaaagctgctaatactcatgactttatctcg
gcaatggaaaaaggatatgagacagaatgtggagaaagaggaatgcaactttctggtggt
cagaaacaaagaatagccattgccagagcctttttgagaaatcctataatacttctactt
gatgaggttacgagttccttggactctaaatcagagcatgaggttcaagacgctctagct
cggatcatggctagccggaagatgactactgtagtagtggctcaccgcatcaacaccttg
aacaatttggattgtattgcggtgatcgcagatggaaccgtagtagagacagggagttac
gaccgcttgaaaaatagtagaggccagttctctaaactttttcatgcgcatgatctcgaa
tcttga
DBGET
integrated database retrieval system
