KEGG   Capsella rubella (pink shepherd's-purse): 17885781
Entry
17885781          CDS       T02984                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03018  RNA degradation
crb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    17885781
  09123 Folding, sorting and degradation
   03018 RNA degradation
    17885781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crb03019]
    17885781
   03041 Spliceosome [BR:crb03041]
    17885781
Messenger RNA biogenesis [BR:crb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     17885781
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     17885781
Spliceosome [BR:crb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    17885781
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 17885781
NCBI-ProteinID: XP_006292107
UniProt: R0HIJ3
LinkDB
Position
Unknown
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDHDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFVQPEAV
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtctggaagaaaagaaacggttttggatttggctaagtttgtggataagggtgtgcaa
gttaagctcactggtggtagacaagtcactggaactttaaagggttatgaccaattgctc
aatcttgttcttgatgaagcagtagaattcttgagagatcacgatgatcctttgaagact
acagatcagacaagacgccttggtttaattgtttgccgtggaacagcggtcatgcttgtc
tcaccaaccgatggcactgaagaaatcgctaacccatttgttcaaccagaagctgtctaa

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