Capsella rubella (pink shepherd's-purse): 17885899
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Entry
17885899 CDS
T02984
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04142
Lysosome biogenesis
crb04145
Phagocytosis
crb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
17885899
04142 Lysosome biogenesis
17885899
04148 Efferocytosis
17885899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17885899
Membrane trafficking [BR:
crb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
17885899
Hops complex
17885899
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
DUF2067
Motif
Other DBs
NCBI-GeneID:
17885899
NCBI-ProteinID:
XP_006290797
UniProt:
R0HF39
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MAQIPNLENAPLNLKSIREKSQRELVNLLKDIRGTKCLVIDPKLSGSISLIIQTSLLKEL
GLELRHLSAEPVQTECTKVIYLVRTQLSFMKFIASHIQNDISKAIQRDYYVYFVPRRSVA
CEKILEQEQVHNLVTVKEFPLYMVPLDEDVISFELELSEKDCLVDGDVSSIWHVAKAIHE
LEFSFGVISKVRAKGKASVRVADILNRMQVEEPVNTNDVGRPEVDTLILLDREVDMVTPM
CSQLTYEGLIDEFLHISNGAVEVDSSVMGAQQEGRKMKVPLNSSDKLFKETRDLNFEVVV
QVLRQKAMSMKEDYTEINSTQTVSELKDFVKKLNSLPEMTRHIHLAQHLTTFTSKQSFLS
QLDMEQTLVEAESYDICYEYIEEMIHKQEPLTNVLRLLVLFSVTNSGLPKKQFDYIRMEL
LHSYGFEHVVTLNNLEKAGLLKKQEFKSNWLTVKRTLKLIVQDTDTSRPNDISYVYSGYA
PLSIRLIQQAIHSGWRPMEDILKLLPGPHLETKRSGFPSSPSVDSLHGASNGVADGRRSI
VLVVFIGGVTFAEISALRYLASKEGMAYDLIIATTKIVNGATLIETFMEKLG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatcccaaacttggaaaatgctcccctcaatctcaaatccattagggagaag
tctcagagagagctcgttaacttgcttaaagacattcgtggaactaagtgtctggttatt
gatccaaagctcagtggctccatttcattgatcatccagacgtctttgctgaaggaactt
ggtttggagttacgacatctttctgcagaaccagttcagactgaatgcacaaaagttata
tatcttgttcgcactcaactcagttttatgaaattcatagcttctcacattcagaacgat
atttcaaaagcgattcaaagagactactacgtttactttgtccctcgtaggtcagttgca
tgtgagaagattctcgagcaggaacaagtgcataacctggttactgtgaaggagtttcct
ctgtatatggttccactagatgaggatgtgatttcatttgagcttgagctctctgaaaaa
gactgccttgtggatggggatgttagctcaatttggcatgtcgcaaaagccatacatgag
cttgagttttcttttggagttatatcaaaagtgagagcaaagggaaaagcatcagttcgt
gttgcagacatactaaaccgcatgcaagtggaggaacctgtcaatacgaatgatgtggga
aggcctgaggtggatactctcattctattggatagagaggttgacatggttactcctatg
tgctcccaattaacttatgagggactgatagacgagtttttgcatatcagtaatggagct
gtcgaagttgactcatctgtgatgggtgctcagcaggagggaagaaagatgaaagttccc
cttaattcaagcgataagttgttcaaggagacaagggatctcaactttgaagtcgttgta
caggttttacgtcagaaggcaatgtctatgaaggaggactacactgaaattaattctacc
cagacagtttctgagctaaaggactttgttaagaagcttaactcattaccagagatgaca
aggcacatacatctggcccagcatctgacgacattcacatctaagcaatcatttctttcg
caacttgatatggaacaaacacttgttgaggcagaaagttatgacatatgctatgagtac
atagaagagatgatccataaacaagagcctctcactaatgtcttacgtctattagttcta
ttttctgttacaaactcagggctacctaaaaagcaatttgattatataagaatggaacta
ctccacagttatggatttgagcatgtagtcacattgaacaacttagaaaaagcaggattg
ttgaagaagcaggaatttaaaagcaactggctgacagtgaaacggacactgaaacttata
gttcaagatactgatacatcaaggcctaatgatatctcttatgtctattctggatatgct
cctcttagcattcgtcttatccaacaagctattcattctggatggcgccctatggaagac
attttgaaactgttacctggaccacatttggaaactaaaagaagtggattcccaagtagt
ccatcagttgattcactgcatggagcttcaaatggggttgctgatggtagacgctcaatc
gttcttgttgtcttcattggaggtgtaacatttgccgagatctctgctctgcggtatctt
gcctctaaggaaggaatggcgtatgatttgattattgctacgacaaaaatcgtcaatggc
gcaacattgatagaaacattcatggaaaaactaggctga
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